PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy014098

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

LBD

Protein Properties

Length: 237aa MW: 25216.7 Da PI: 6.266

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59521978	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	85.7	6.5e-27	4	107	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +C++C+vlr++C+ +C++ p++ p++q++++ +++k++G++ +l+ll+a +++ r+++++sl+yeA+ r+ +Pv G++g++++++++l+++++e++ Ahy014098 4 SCNGCRVLRKGCNLECPIKPCLnwiksPESQSNATLFLAKFYGRAGLLNLLTAGDPKIRPAIFKSLLYEACGRIVNPVFGSTGLLSTGSWHLCEAAVEAV 103 6************************************************************************************************998 PP DUF260 96 llke 99 l ++ Ahy014098 104 LSGA 107 8766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50891	15.727	3	109	IPR004883	Lateral organ boundaries, LOB
Pfam	PF03195	5.3E-22	4	103	IPR004883	Lateral organ boundaries, LOB

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence Send to blast
MRLSCNGCRV LRKGCNLECP IKPCLNWIKS PESQSNATLF LAKFYGRAGL LNLLTAGDPK 60 IRPAIFKSLL YEACGRIVNP VFGSTGLLST GSWHLCEAAV EAVLSGAPIR QQDASDGGGQ 120 LLNPSDIRHV VKRGKSCSSD NVLKPRKSQF KRRAEKSKPE PEVKLDQGVA ELVVEACVVN 180 ELDDSASPDS GSGLSEHVSV VVGGGAEADS GSIESVNPAR ADDGELELEL TLGCQWL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015966681.1	1e-170	LOB domain-containing protein 41
TrEMBL	A0A445D2Q9	1e-167	A0A445D2Q9_ARAHY; Uncharacterized protein
STRING	GLYMA07G10180.1	4e-82	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02550.1	9e-62	LOB domain-containing protein 41