![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Ahy014224 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
||||||||
| Family | HD-ZIP | ||||||||
| Protein Properties | Length: 814aa MW: 89053.4 Da PI: 6.1744 | ||||||||
| Description | HD-ZIP family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 58.5 | 1.2e-18 | 17 | 75 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
k ++t+eq+e+Le++++++++ps +r++L +++ +++ +q+kvWFqNrR +ek+
Ahy014224 17 KYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 75
6789*****************************************************97 PP
| |||||||
| 2 | START | 174.9 | 4.8e-55 | 168 | 375 | 2 | 204 |
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXXT CS
START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvaelq 99
+aee+++e+++ka+ ++ Wv++ +++g++++ +++ s+++sg a+ra+g+v +++ v+e+l+d++ W ++++ ++l + +g g+++l++++++
Ahy014224 168 IAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPT-KVAEILKDRPSWYRDCRCLDVLSIVPTGsgGTIELIYMQTY 266
68999*****************************************************.8888888888******************************* PP
TXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHH CS
START 100 alsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaegakt 195
a+++l++ Rdf++vRy+ +l++g++vi+++S++s + p+ ss++vRae+lpSg+li+p+++g+s +++v+hvdl+ ++++++lr+l++s+ + ++k
Ahy014224 267 APTTLAAaRDFWTVRYTTSLEDGSLVICERSLTSSTGGPTgppSSNFVRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKL 366
***********************************99999999********************************************************* PP
HHHHTXXXX CS
START 196 wvatlqrqc 204
+ a+lq+ +
Ahy014224 367 TIAALQHIR 375
******866 PP
| |||||||
| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| PROSITE profile | PS50071 | 15.742 | 12 | 76 | IPR001356 | Homeobox domain |
| SMART | SM00389 | 8.6E-16 | 14 | 80 | IPR001356 | Homeobox domain |
| CDD | cd00086 | 1.07E-16 | 17 | 77 | No hit | No description |
| SuperFamily | SSF46689 | 1.24E-16 | 17 | 79 | IPR009057 | Homeodomain-like |
| Pfam | PF00046 | 3.0E-16 | 17 | 75 | IPR001356 | Homeobox domain |
| Gene3D | G3DSA:1.10.10.60 | 1.4E-18 | 19 | 75 | IPR009057 | Homeodomain-like |
| CDD | cd14686 | 1.70E-6 | 69 | 108 | No hit | No description |
| PROSITE profile | PS50848 | 25.069 | 158 | 359 | IPR002913 | START domain |
| CDD | cd08875 | 6.24E-69 | 164 | 378 | No hit | No description |
| SMART | SM00234 | 1.6E-51 | 167 | 377 | IPR002913 | START domain |
| Gene3D | G3DSA:3.30.530.20 | 1.3E-22 | 167 | 350 | IPR023393 | START-like domain |
| Pfam | PF01852 | 1.6E-52 | 168 | 375 | IPR002913 | START domain |
| SuperFamily | SSF55961 | 5.08E-38 | 168 | 379 | No hit | No description |
| SuperFamily | SSF55961 | 2.61E-5 | 416 | 500 | No hit | No description |
| SuperFamily | SSF55961 | 2.61E-5 | 528 | 603 | No hit | No description |
| Pfam | PF08670 | 2.4E-32 | 700 | 813 | IPR013978 | MEKHLA |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| GO:0008289 | Molecular Function | lipid binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 814 aa Download sequence Send to blast |
MALSMHKDAS NSMDSSKYVR YTPEQVEALE RVYAECPKPS SLRRQQLIRE CPILSNIEPK 60 QIKVWFQNRR CREKQRKEAS RLQTVNRKLT AMNKLLMEEN DRLQKQVSHL VYENGYMKQQ 120 IHTASATTTT DNSCESVVMS GQNQQQQNPT PQHPQRDANN PAGLLSAIAE ETLAEFLSKA 180 TGTAVDWVQM IGMKPGPDSI GIVAVSRNCS GVAARACGLV SLEPTKVAEI LKDRPSWYRD 240 CRCLDVLSIV PTGSGGTIEL IYMQTYAPTT LAAARDFWTV RYTTSLEDGS LVICERSLTS 300 STGGPTGPPS SNFVRAEMLP SGYLIRPCEG GGSIIHIVDH VDLDVWSVPE VLRPLYESSK 360 ILAQKLTIAA LQHIRQIAQE SSGEIQYGGG RQPAVLRTFS QRLCRGFNDA VNGFVEDGWS 420 LLGNDGVEDV TIAINSSPNK FLGSQYNSSM FPAFGGGVLC AKASMLLQNV PPALLVRFLR 480 EHRSEWADYG VDAYSAACLK ATPYAVPCAR PGGFPSTQVI LPLAHTIEHE EFLEVVRIEG 540 HAFSPEDVAL ARDMYLLQLC SGVDENAIGA CAQLVFAPID ESFADDALLL PSGFCVIPLD 600 PKTDTPTTTR TLDLASTLEV GSGNTRAAGE ADDYNLRSVL TIAFQFTFEN HLRDNVAAMA 660 RQYVRSVVGS VQRVAMAIAP SRLSTQLGPK SLPGSPEALT LARWISRSYR VHTGSDLFRV 720 ESTAGDAILK QLWQHSDAIM CCSVKTNASP VFTFANQAGL DMLETTLVAL QDIMLDKVLD 780 ESGRKILCSE FSKIMQQGFA YLPAGICASS MNRP |
| Functional Description ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Description | |||||
| UniProt | Probable transcription factor. {ECO:0000250}. | |||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_025694278.1 | 0.0 | homeobox-leucine zipper protein ATHB-14 | ||||
| Swissprot | Q6AST1 | 0.0 | HOX32_ORYSJ; Homeobox-leucine zipper protein HOX32 | ||||
| TrEMBL | A0A444WNN6 | 0.0 | A0A444WNN6_ARAHY; Uncharacterized protein | ||||
| STRING | XP_004486450.1 | 0.0 | (Cicer arietinum) | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT2G34710.1 | 0.0 | HD-ZIP family protein | ||||
| Publications ? help Back to Top | |||
|---|---|---|---|
|
|||




