PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy014320
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 415aa    MW: 47594.8 Da    PI: 8.492
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59542994PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.78.5e-135861198
               HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
         B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
               l++g+l +p+kf +++g+    +  + l+  +  +W++    ++k+g+++++kGWkeF+    L+ g  + F+++g+s+    v++f+
  Ahy014320  5 LQNGILKVPNKFSKKYGNG--FPNPVYLKPADDTEWKIDW--TNKDGEILFEKGWKEFAAYYSLENGHLLWFEYNGTSKI--EVQIFD 86
               68899***********866..4556***************..********************************986555..888887 PP
2B342.21.5e-13323412498
                E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
         B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                + ++++ l+++r ++p +f++++ +kk e+   ++   +++ W vkl    ++   ++++GW  F+ +n+Lk+gD+++++l++ +++ l  +++r
  Ahy014320 323 IKITESDLSKSRASVPVSFFNKYFEKK-EP--YVVIRFDSKLWPVKL--LCYQANAYISRGWLAFALDNNLKAGDVCILELVNGKDALLECRIYR 412
                345677777778***********6554.44..77888999*******..556666789**********************998777766666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086312.647188IPR003340B3 DNA binding domain
SMARTSM010199.7E-5188IPR003340B3 DNA binding domain
PfamPF023621.9E-9586IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.0E-16689IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.14E-16795IPR015300DNA-binding pseudobarrel domain
CDDcd100174.51E-8886No hitNo description
Gene3DG3DSA:2.40.330.101.7E-11184286IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.63E-9186286IPR015300DNA-binding pseudobarrel domain
SMARTSM010190.032192287IPR003340B3 DNA binding domain
PROSITE profilePS508638.628248287IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.104.2E-20313410IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019367.26E-19314412IPR015300DNA-binding pseudobarrel domain
CDDcd100175.63E-16319412No hitNo description
PROSITE profilePS5086311.589320414IPR003340B3 DNA binding domain
SMARTSM010191.0E-11321414IPR003340B3 DNA binding domain
PfamPF023621.7E-11323413IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
XTESLQNGIL KVPNKFSKKY GNGFPNPVYL KPADDTEWKI DWTNKDGEIL FEKGWKEFAA  60
YYSLENGHLL WFEYNGTSKI EVQIFDMSCL EIEYPSNDLI NDGNLAGILN EQPQPKKKAK  120
AAPKPSSPSR SKRVKFTVKT IDVEDSEEDS ELDSQSKETQ LKKLPYVDDF YPGTSGFQAL  180
NEAQKFKSEN PFFIVKARQS NVSRPTVNFQ ASFFRKYFEK EQNVQIRFQK ILIPAKLRCY  240
PYNSHAIIAS GWGLFVRTST LQPGDVTIFE LIEREDPVLD VHIYRAQDFQ PQVSGIQSQK  300
EAKKSKCPKE FKNSESQNPS FVIKITESDL SKSRASVPVS FFNKYFEKKE PYVVIRFDSK  360
LWPVKLLCYQ ANAYISRGWL AFALDNNLKA GDVCILELVN GKDALLECRI YRADG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016182542.10.0B3 domain-containing protein LOC_Os12g40080-like isoform X1
RefseqXP_016182543.10.0B3 domain-containing protein LOC_Os12g40080-like isoform X1
RefseqXP_016182544.10.0B3 domain-containing protein LOC_Os12g40080-like isoform X1
RefseqXP_025680646.10.0B3 domain-containing protein LOC_Os12g40080
TrEMBLA0A444XAV30.0A0A444XAV3_ARAHY; Uncharacterized protein