PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy014345
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 495aa    MW: 57454.8 Da    PI: 10.8036
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58472684PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-9379PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.82.7e-1534125198
                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SSSEE..EEEEE- CS
         B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.grsefelvvkvfr 98 
                ffk+ ++++   ++ ++l+kkf++++g+    s  l l+ ++g +W+v+   +++ gr+++++GWkeFv    L+ g ++ F+++ g  + +  v +f+
  Ahy014345  34 FFKIIVRESLQDEN-FMLSKKFTRKYGSG--LSNPLYLKPPDGTEWRVNW--TNRNGRTLFKRGWKEFVAYYSLDHGHVLWFEYNiG--TSHIEVEIFD 125
                88999888888887.***********755..6667***************..9999***************************9733..4445777765 PP
2B342.89.1e-142913701799
                E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
         B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                +++ kf++++ ++++++  +++     + + vkliyr +s+  ++++GW+ F++a +L++gD+++Fkl++r++  l v+++r+
  Ahy014345 291 YFSTKFFRKYFENNPQNANIRFG---KKLFPVKLIYRPSSCDAFISAGWNFFARASKLQAGDVCLFKLVNRKDPVLDVHICRR 370
                67789999996666777777754...499****************************************999999******98 PP
3B351.22.2e-164104931299
                HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
         B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                +++r  l+  f +++ +k++++  ++l+    + W v++iy+ +s+ +++++GW++F++a +L++gD++vF+l+++++  ++v+v+r 
  Ahy014345 410 RRSRPNLSAIFYRKYFKKNQQN--VKLQ-FGKKLWPVTIIYNPSSRNTFISAGWSSFARASKLEAGDVCVFELINEKDL-FNVHVCRV 493
                4556778888999997665555..5543.46699****************************************97444.69999985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.104.3E-1927128IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.03E-1831134IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.98433127IPR003340B3 DNA binding domain
CDDcd100177.79E-1433125No hitNo description
PfamPF023625.5E-1234125IPR003340B3 DNA binding domain
SMARTSM010191.5E-1034127IPR003340B3 DNA binding domain
SuperFamilySSF1019361.7E-11270370IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.109.2E-14272370IPR015300DNA-binding pseudobarrel domain
SMARTSM010192.6E-4276371IPR003340B3 DNA binding domain
PfamPF023623.5E-12290371IPR003340B3 DNA binding domain
CDDcd100175.33E-10291369No hitNo description
PROSITE profilePS508639.234317371IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.6E-20392493IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019364.22E-18393493IPR015300DNA-binding pseudobarrel domain
CDDcd100173.68E-16398492No hitNo description
SMARTSM010194.5E-14400494IPR003340B3 DNA binding domain
PfamPF023623.2E-14414493IPR003340B3 DNA binding domain
PROSITE profilePS5086311.265441494IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 495 aa     Download sequence    Send to blast
SLNNTQIHPS SIAMAPSNYQ QNKHSPSSST VIRFFKIIVR ESLQDENFML SKKFTRKYGS  60
GLSNPLYLKP PDGTEWRVNW TNRNGRTLFK RGWKEFVAYY SLDHGHVLWF EYNIGTSHIE  120
VEIFDMSCLE IEYPANDQIK KHPPQHRGQP VKRPKEQQTR DVDNSPNTQN MRLNEGRQKK  180
RLNEPLSGGV RGQPRKKLRA PVSSASKGRQ LENDAQIRKG IKSKKKNHKM TVSVNQDSNG  240
KSNRRRKDSE SSVRPYPTKP ESLKEANKFK WEKPSFIIKI KQLSQTKAPC YFSTKFFRKY  300
FENNPQNANI RFGKKLFPVK LIYRPSSCDA FISAGWNFFA RASKLQAGDV CLFKLVNRKD  360
PVLDVHICRR QRRESLSKPV THGIQLLKEV EELNSQNPSF MVKIKDSDPR RSRPNLSAIF  420
YRKYFKKNQQ NVKLQFGKKL WPVTIIYNPS SRNTFISAGW SSFARASKLE AGDVCVFELI  480
NEKDLFNVHV CRVQC
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025624625.10.0B3 domain-containing transcription factor VRN1 isoform X1
TrEMBLA0A445B1P90.0A0A445B1P9_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.19e-21B3 family protein