PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy014664
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C3H
Protein Properties Length: 208aa    MW: 24146 Da    PI: 10.1615
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58471592PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH283.8e-09175196426
                ---SGGGGTS--TTTTT-SS-SS CS
    zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 lCr++ar G C +Gd+CkF H+
  Ahy014664 175 QLCRYYAR-GRCYFGDNCKFVHD 196
                79******.*************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF902292.35E-8171196IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010315.892172198IPR000571Zinc finger, CCCH-type
SMARTSM003561.5E-5172197IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.107.8E-7174196IPR000571Zinc finger, CCCH-type
PfamPF006421.5E-6174196IPR000571Zinc finger, CCCH-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MGDEGERQKI LTEKHSRGSI AREDREARVQ EKVNRKAIVE NRVSRKHSVI HHPHAINQEK  60
PAFPFKSSAV SAINQEKPPF PSVVTEQGGK SVSFRRSNES TSFGVNHVNN QQDWKHSSDP  120
IIIAQLGDLH SKQKEQYQYQ YHPSERNRFA QRNPLTSANH LLPLLNNREI HKQKQLCRYY  180
ARGRCYFGDN CKFVHDLILS NQEQSFIH
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016177257.11e-146zinc finger CCCH domain-containing protein 62
RefseqXP_020967035.11e-146zinc finger CCCH domain-containing protein 62
RefseqXP_025677852.11e-145zinc finger CCCH domain-containing protein 62
TrEMBLA0A444XFQ41e-143A0A444XFQ4_ARAHY; Uncharacterized protein
STRINGGLYMA16G01296.22e-33(Glycine max)