PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy014982
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 105aa    MW: 11993.5 Da    PI: 9.39
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S54132745PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.32.2e-101862244
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                      rWT+ E +l+ +a +++ ++   +W  +a+ +g g++  ++k ++
        Ahy014982 18 SRWTAKENKLFEKALAEYDKDtadRWQNVAKAVG-GKSVDEVKRHY 62
                     69********************************.**********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129312.3331570IPR017884SANT domain
SMARTSM007174.1E-91668IPR001005SANT/Myb domain
SuperFamilySSF466899.33E-131874IPR009057Homeodomain-like
CDDcd001671.55E-71966No hitNo description
PfamPF002491.4E-81962IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.6E-51967IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    Send to blast
MASTTLSKQK KPSSESSSRW TAKENKLFEK ALAEYDKDTA DRWQNVAKAV GGKSVDEVKR  60
HYEILLEDLR HIESGHVPIP NYKSTPSTTT NLDEEQRLLK YLKLS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A2e-3113104392RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016193149.15e-72protein RADIALIS-like 4
RefseqXP_020993062.15e-72protein RADIALIS-like 4 isoform X2
RefseqXP_025642341.15e-72protein RADIALIS-like 4 isoform X1
RefseqXP_025686468.15e-72protein RADIALIS-like 4 isoform X2
SwissprotQ1A1734e-34RADL6_ARATH; Protein RADIALIS-like 6
TrEMBLA0A445E3H37e-65A0A445E3H3_ARAHY; Uncharacterized protein
STRINGGLYMA12G04680.21e-50(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.11e-35RAD-like 1