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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Ahy014988 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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| Family | bZIP | ||||||||
| Protein Properties | Length: 266aa MW: 28478.5 Da PI: 8.0574 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 40.1 | 7.7e-13 | 228 | 264 | 3 | 39 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39
+ kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L
Ahy014988 228 DAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLR 264
579*******************************996 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| PROSITE profile | PS50217 | 9.91 | 228 | 266 | IPR004827 | Basic-leucine zipper domain |
| Pfam | PF00170 | 1.1E-10 | 229 | 264 | IPR004827 | Basic-leucine zipper domain |
| SuperFamily | SSF57959 | 6.03E-9 | 230 | 264 | No hit | No description |
| Gene3D | G3DSA:1.20.5.170 | 2.5E-9 | 230 | 263 | No hit | No description |
| PROSITE pattern | PS00036 | 0 | 233 | 248 | IPR004827 | Basic-leucine zipper domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 266 aa Download sequence Send to blast |
MERVFSVEEI SEAFILPAAK RMDELTAKST MNRSASEWAF QRFLQEASSA VSATVASPCS 60 SSSSVVEIKQ DLSQNMETKP LQNGTTVAVL PNATASSSSS SVAVDSEDYQ AILKTKLKLA 120 CAAVALTRGS LVKSQVPASF SECTSQATNL SQVASHATLK GSGPSGNDSS KVQNKDAKVP 180 VGIPSLSGVQ NKPAVAIRST TSGSSKDQSD DEEAEEEINM TENMDPTDAK RVRRMLSNRE 240 SARRSRRRKQ AHLTELETQV SQLRGX |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 242 | 249 | RRSRRRKQ |
| 2 | 244 | 249 | SRRRKQ |
| Functional Description ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Description | |||||
| UniProt | Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. | |||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_016205413.1 | 0.0 | light-inducible protein CPRF2 | ||||
| Refseq | XP_025662683.1 | 0.0 | light-inducible protein CPRF2 | ||||
| Swissprot | Q99090 | 7e-51 | CPRF2_PETCR; Light-inducible protein CPRF2 | ||||
| TrEMBL | A0A371G4H7 | 1e-78 | A0A371G4H7_MUCPR; Light-inducible protein CPRF2 (Fragment) | ||||
| TrEMBL | A0A445INA4 | 1e-78 | A0A445INA4_GLYSO; Light-inducible protein CPRF2 | ||||
| TrEMBL | I1NIQ2 | 3e-79 | I1NIQ2_SOYBN; Uncharacterized protein | ||||
| STRING | GLYMA10G30410.1 | 3e-79 | (Glycine max) | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G28770.3 | 4e-27 | bZIP family protein | ||||
| Publications ? help Back to Top | |||
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