PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy015065

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

HB-other

Protein Properties

Length: 183aa MW: 20317 Da PI: 5.8204

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59547143	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	20.3	9.5e-07	69	125	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ ++ ++++F + +s++e +e+++ g+t +qV+ +F +R + ++ Ahy015065 69 KRPRDLLNPKAVNYMQSVFSIKDAISKKESREISALFGVTVTQVRDFFNGQRSRVRR 125 799**************************************************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50071	9.588	66	126	IPR001356	Homeobox domain
SuperFamily	SSF46689	2.69E-7	68	133	IPR009057	Homeodomain-like
SMART	SM00389	0.0033	68	130	IPR001356	Homeobox domain
CDD	cd00086	2.25E-5	69	125	No hit	No description
Gene3D	G3DSA:1.10.10.60	1.2E-6	69	139	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence Send to blast
MDFPNDDFLE LPIGNSAESL QRFLASQRDL FHSQIDQFQE IVVTQCKLTG VNPLSQEMAA 60 GALSIKIGKR PRDLLNPKAV NYMQSVFSIK DAISKKESRE ISALFGVTVT QVRDFFNGQR 120 SRVRRFVLSS REKALKSNSC EEPHDELINS DPMRPINPAP LNSIMPSNAE GASCSTQDAA 180 LSD

Functional Description ? help Back to Top
Source	Description
UniProt	Seems to play a role in the regulation of flowering time in the autonomous flowering pathway by repressing FLOWERING LOCUS C expression. {ECO:0000269\|PubMed:10363371}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016205166.1	1e-124	homeobox protein LUMINIDEPENDENS isoform X1
Refseq	XP_025660737.1	1e-124	homeobox protein LUMINIDEPENDENS isoform X1
Swissprot	Q38796	6e-61	LUMI_ARATH; Homeobox protein LUMINIDEPENDENS
TrEMBL	A0A444YI75	1e-123	A0A444YI75_ARAHY; Uncharacterized protein
STRING	GLYMA03G36970.2	3e-97	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	5e-58	HB-other family protein

Publications ? help Back to Top
Chakrabortee S, et al. Luminidependens (LD) is an Arabidopsis protein with prion behavior. Proc. Natl. Acad. Sci. U.S.A., 2016. 113(21): p. 6065-70 [PMID:27114519]