PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy015069
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C3H
Protein Properties Length: 704aa    MW: 79130 Da    PI: 5.4075
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59525137PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.83.4e-07128150427
                ---SGGGGTS--TTTTT-SS-SSS CS
    zf-CCCH   4 elCrffartGtCkyGdrCkFaHgp 27 
                ++C ff++ G C  GdrC F Hgp
  Ahy015069 128 VPCIFFQK-GLCLKGDRCAFLHGP 150
                69******.*************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5010310.6063261IPR000571Zinc finger, CCCH-type
SMARTSM003560.0023360IPR000571Zinc finger, CCCH-type
PfamPF156635.8E-123387No hitNo description
PROSITE profilePS5010311.1786389IPR000571Zinc finger, CCCH-type
SMARTSM003560.126588IPR000571Zinc finger, CCCH-type
SMARTSM003562.4E-5124150IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010314.408124151IPR000571Zinc finger, CCCH-type
SuperFamilySSF902291.22E-5125149IPR000571Zinc finger, CCCH-type
PfamPF146080.024129149No hitNo description
Gene3DG3DSA:4.10.1000.109.9E-5129150IPR000571Zinc finger, CCCH-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 704 aa     Download sequence    Send to blast
MVAQHPQPQP QPQPQPQPQP QQPPSSAQDE ALKRNTDCVY FLASPLTCKK GNECEYRHSE  60
YARVNPRDCW YWLNGNCLNP KCAFRHPPLD GLLGSPAATA AGPSVPSSQI PATPAAPAAP  120
YNSTKQAVPC IFFQKGLCLK GDRCAFLHGP NPTAGNKAVN QXPPVSNQGT ETPSLKKPFG  180
SRDKNAQERR SSQGNIPKLV GGLEIKPSLK VETAPQRNNF ELVKEKHVAP PPAGFDDEAS  240
RFKMRSISPV ANGPTAARSN RLHQVRMPDD NSFHNGKDSD EFLRESSPGF DVLVADELRN  300
SDYYHGEDEF GNARGPDERN LDSLNDYDLG HSADYGLARD IDQERFRVPQ SYDSYDHMQE  360
PYAWEQHRKA PGHLERRSHR RSDSPDNVEV SDLRHRLSKR RRVNGLKSVV SNDFDSHGDQ  420
QSHHSRKDSH QLPLNDRFRG RIKLPASGAD DNPERESDRG RIRSRLSTGR LPTPHQGRLQ  480
DRIKGRVQDD ERRNFRERSI GREAMGDRSD FSGPKSLAEL KNGRSSEYKE HQSLGKRKSL  540
REQSQSEGDF QFDGPKPLSE ILKEKRRVGA GVSSQSEIVH SSDDTAVTNT QNGALPEAKE  600
GAKNHSLINE EETKLQDTDT AGREIDNNEG NRDQSYEDGM IYDEAAEEQE YEGDDQRDGE  660
YDYEQVDEGE YDYEQVDEGE NPEQEYMEDE DGDDFAKKIG VMTT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1398402KRRRV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016191249.10.0zinc finger CCCH domain-containing protein 17
RefseqXP_025639887.10.0zinc finger CCCH domain-containing protein 17
TrEMBLA0A445DLT50.0A0A445DLT5_ARAHY; Uncharacterized protein
STRINGXP_004504622.10.0(Cicer arietinum)