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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Ahy015602 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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| Family | C2H2 | ||||||||
| Protein Properties | Length: 132aa MW: 14627.2 Da PI: 7.127 | ||||||||
| Description | C2H2 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | zf-C2H2 | 13.9 | 0.00016 | 69 | 91 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++Cp+C k F++ L H r+H
Ahy015602 69 HECPICYKIFKSGQALGGHKRSH 91
79*******************99 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SuperFamily | SSF57667 | 8.57E-5 | 66 | 92 | No hit | No description |
| Pfam | PF13912 | 1.8E-11 | 69 | 91 | IPR007087 | Zinc finger, C2H2 |
| PROSITE profile | PS50157 | 9.078 | 69 | 91 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 71 | 91 | IPR007087 | Zinc finger, C2H2 |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0046872 | Molecular Function | metal ion binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 132 aa Download sequence Send to blast |
MNMMIVXSYD STEYDDVDED EESDENSTDT DTDSFPAPKA HSTKASTKAN KKKKNMKKKK 60 LKSKKSKEHE CPICYKIFKS GQALGGHKRS HFIGGSSEEN TLVIKQHHAA PSSLVVVPNC 120 LIDLNLPAPV DD |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_025690835.1 | 6e-84 | uncharacterized protein LOC112791982 | ||||
| Refseq | XP_025690836.1 | 6e-84 | uncharacterized protein LOC112791982 | ||||
| TrEMBL | A0A444ZUE1 | 1e-82 | A0A444ZUE1_ARAHY; Uncharacterized protein | ||||
| STRING | XP_007158625.1 | 9e-33 | (Phaseolus vulgaris) | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G26610.1 | 1e-19 | C2H2-like zinc finger protein | ||||




