PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy016137

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

BBR-BPC

Protein Properties

Length: 283aa MW: 31307.9 Da PI: 10.2823

Description

BBR-BPC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S58473111	PU_ref	Unigene	View CDS
PUT-171a-Arachis_hypogaea-16472	PU_unref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GAGA_bind	356.6	5.1e-109	1	283	1	301
GAGA_bind 1 mdddgsre.rnkgyyepaaslkenlglqlmssiaerdaki.rernlalsekkaavaerd.........maflqrdkalaernkalverdnkllalllven 89 md d+ + rn+gyyepa+s+k++lglqlmss++e+ r++ + ls++++a+++rd m++ +rd+++++ +++k++++++++ Ahy016137 1 MDGDNGLNiRNWGYYEPATSFKSHLGLQLMSSMPEKPLLGgRNAAV-LSGTNGAYHHRDigmppatypMDY-MRDAWISS-------QREKYMNMIPTNP 91 888888888***********************998766455555.9*******************.****.......889***655 PP GAGA_bind 90 slasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderska 189 +++++++t+s++++q+ ++ +e + +e+ p+eea+ ++k +++ kkrq +k+pk++kakk+k+ ++++k+++++ +r++a Ahy016137 92 --------SYGSIPETSSTHHMQM----------IPPPELSAKEERPVEEAPVVEKANTTGKKRQGPKVPKSPKAKKPKRGPRVPKDENAPTV--QRARA 171 ........599*********..........23345566677888888888889999999999**********9999977777776..79* PP GAGA_bind 190 ekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhW 289 +kk++++v+ng++lD+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtt +S+yPLP+stkrrgaRiagrKmS gafkk+LekLaaeGy++snp+DL+++W Ahy016137 172 PKKTTEIVINGIDLDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGMSTYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYW 271 ************************************************************************************************** PP GAGA_bind 290 AkHGtnkfvtir 301 AkHGtnkfvtir Ahy016137 272 AKHGTNKFVTIR 283 *********8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF06217	3.7E-113	1	283	IPR010409	GAGA-binding transcriptional activator
SMART	SM01226	1.0E-169	1	283	IPR010409	GAGA-binding transcriptional activator

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence Send to blast
MDGDNGLNIR NWGYYEPATS FKSHLGLQLM SSMPEKPLLG GRNAAVLSGT NGAYHHRDIG 60 MPPATYPMDY MRDAWISSQR EKYMNMIPTN PSYGSIPETS STHHMQMIPP PELSAKEERP 120 VEEAPVVEKA NTTGKKRQGP KVPKSPKAKK PKRGPRVPKD ENAPTVQRAR APKKTTEIVI 180 NGIDLDISSI PIPVCSCTGT PQQCYRWGSG GWQSACCTTG MSTYPLPMST KRRGARIAGR 240 KMSIGAFKKV LEKLAAEGYN FSNPIDLRTY WAKHGTNKFV TIR

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. Negatively regulates the homeotic gene AGL11/STK, which controls ovule primordium identity, by a cooperative binding to purine-rich elements present in the regulatory sequence leading to DNA conformational changes. {ECO:0000269\|PubMed:14731261, ECO:0000269\|PubMed:15722463}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015966841.1	0.0	protein BASIC PENTACYSTEINE2
Refseq	XP_015966842.1	0.0	protein BASIC PENTACYSTEINE2
Refseq	XP_016203362.1	0.0	protein BASIC PENTACYSTEINE2
Refseq	XP_016203363.1	0.0	protein BASIC PENTACYSTEINE2
Refseq	XP_020958387.1	0.0	protein BASIC PENTACYSTEINE2
Refseq	XP_025655545.1	0.0	protein BASIC PENTACYSTEINE2 isoform X1
Refseq	XP_025655546.1	0.0	protein BASIC PENTACYSTEINE2 isoform X1
Swissprot	Q9SKD0	1e-96	BPC1_ARATH; Protein BASIC PENTACYSTEINE1
TrEMBL	A0A445D1C4	0.0	A0A445D1C4_ARAHY; Uncharacterized protein
STRING	GLYMA09G30040.4	0.0	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14685.3	5e-90	basic pentacysteine 2