PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy016384

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

HD-ZIP

Protein Properties

Length: 210aa MW: 24424.6 Da PI: 8.1924

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59552647	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.5	2.7e-19	57	111	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++++eq++ Le F +++++ e++ +LA +lgL+ rqV vWFqNrRa++k+ Ahy016384 57 KKRKLSEEQVNLLEMNFGNEHKLESERKDKLALELGLDPRQVAVWFQNRRARWKN 111 56699************************************************95 PP
2	HD-ZIP_I/II	117.2	9e-38	56	148	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +kkr+ls+eqv+lLE++F +e+kLe+erK +la eLgl+prqvavWFqnrRAR+k+k+lE++y+ Lkra+++ +++rLe+ev +L+e+l++ Ahy016384 56 NKKRKLSEEQVNLLEMNFGNEHKLESERKDKLALELGLDPRQVAVWFQNRRARWKNKKLEEEYSNLKRAHETTLLDKCRLETEVLKLNEQLSN 148 59***************************************************************************************9975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50071	16.763	52	112	IPR001356	Homeobox domain
SMART	SM00389	7.3E-18	55	116	IPR001356	Homeobox domain
SuperFamily	SSF46689	5.43E-18	56	120	IPR009057	Homeodomain-like
Pfam	PF00046	1.8E-16	57	111	IPR001356	Homeobox domain
CDD	cd00086	1.19E-14	59	113	No hit	No description
Gene3D	G3DSA:1.10.10.60	4.2E-20	59	119	IPR009057	Homeodomain-like
PRINTS	PR00031	2.2E-5	83	92	IPR000047	Helix-turn-helix motif
PROSITE pattern	PS00027	0	87	110	IPR017970	Homeobox, conserved site
PRINTS	PR00031	2.2E-5	92	108	IPR000047	Helix-turn-helix motif

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence Send to blast
MNQRSMDEQM MLISQLYPAG GGAYTQIIAQ QGENKKARRR RNKKKKGGEN GGGEGNKKRK 60 LSEEQVNLLE MNFGNEHKLE SERKDKLALE LGLDPRQVAV WFQNRRARWK NKKLEEEYSN 120 LKRAHETTLL DKCRLETEVL KLNEQLSNAK EEIQRLQDMV PSNSSSSQSQ SQSQSMEIMD 180 PPFLGDYVFC VPETHYINGM EWVDPYENIW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	43	59	KKKGGENGGGEGNKKRK

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By abscisic acid (ABA) and by salt stress. {ECO:0000269\|PubMed:16055682}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016201830.1	1e-154	homeobox-leucine zipper protein ATHB-40 isoform X2
Swissprot	O23208	2e-67	ATB40_ARATH; Homeobox-leucine zipper protein ATHB-40
TrEMBL	A0A151TI40	4e-87	A0A151TI40_CAJCA; Homeobox-leucine zipper protein ATHB-40 (Fragment)
TrEMBL	A0A1S2YYP5	4e-87	A0A1S2YYP5_CICAR; homeobox-leucine zipper protein ATHB-40
STRING	XP_004512013.1	6e-88	(Cicer arietinum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36740.1	9e-57	homeobox protein 40

Publications ? help Back to Top
González-Grandío E, et al. Abscisic acid signaling is controlled by a BRANCHED1/HD-ZIP I cascade in Arabidopsis axillary buds. Proc. Natl. Acad. Sci. U.S.A., 2017. 114(2): p. E245-E254 [PMID:28028241]