PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy016530
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 154aa    MW: 17499 Da    PI: 9.9523
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S54138660PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY63.14.9e-20120153134
                ---SS-EEEEEEE--TT-SS-EEEEEE-STT--- CS
       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpv 34 
                ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+v
  Ahy016530 120 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRV 153
                59******************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.0E-21105153IPR003657WRKY domain
SuperFamilySSF1182901.11E-18112153IPR003657WRKY domain
PROSITE profilePS5081119.393115154IPR003657WRKY domain
SMARTSM007742.7E-9120153IPR003657WRKY domain
PfamPF031063.5E-15121153IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
XFVQFEENHL LGFLSPTSSQ SQSSQLSQSL DAATILATTT TPATIATTTA TTKNWHHKQV  60
GTLDPKAMND ENCTGNSSEG NNNITWWKSS AATEKNKVKM RRKLREPRFC FQTRSDVDVL  120
DDGYKWRKYG QKVVKNSLHP RSYYRCTHSN CRVX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-15111153850Probable WRKY transcription factor 4
2lex_A3e-15111153850Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025649759.11e-111probable WRKY transcription factor 12
SwissprotQ93WY44e-42WRK12_ARATH; Probable WRKY transcription factor 12
TrEMBLA0A445DC891e-108A0A445DC89_ARAHY; Uncharacterized protein
STRINGXP_004515333.12e-63(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.11e-42WRKY family protein
Publications ? help Back to Top
  1. Yu Y, et al.
    MlWRKY12, a novel Miscanthus transcription factor, participates in pith secondary cell wall formation and promotes flowering.
    Plant Sci., 2013. 212: p. 1-9
    [PMID:24094048]
  2. Yang L, et al.
    PtrWRKY19, a novel WRKY transcription factor, contributes to the regulation of pith secondary wall formation in Populus trichocarpa.
    Sci Rep, 2016. 6: p. 18643
    [PMID:26819184]
  3. Li W,Wang H,Yu D
    Arabidopsis WRKY Transcription Factors WRKY12 and WRKY13 Oppositely Regulate Flowering under Short-Day Conditions.
    Mol Plant, 2016. 9(11): p. 1492-1503
    [PMID:27592586]
  4. Han Y, et al.
    WRKY12 represses GSH1 expression to negatively regulate cadmium tolerance in Arabidopsis.
    Plant Mol. Biol., 2019. 99(1-2): p. 149-159
    [PMID:30617455]