PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy016903

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

C2H2

Protein Properties

Length: 212aa MW: 23361.2 Da PI: 8.3877

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59550122	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.2	0.0012	184	203	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C++C+ ++++++ +++Hi Ahy016903 184 VCTICNIVCNSQDVYNKHIA 203 6*****************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF57667	4.61E-9	109	148	No hit	No description
SMART	SM00451	0.21	115	149	IPR003604	Zinc finger, U1-type
SMART	SM00355	8.8	118	142	IPR015880	Zinc finger, C2H2-like
Pfam	PF12874	5.2E-6	119	142	No hit	No description
SuperFamily	SSF57667	2.26E-8	179	211	No hit	No description
SMART	SM00451	0.22	180	212	IPR003604	Zinc finger, U1-type
SMART	SM00355	1	183	207	IPR015880	Zinc finger, C2H2-like
Pfam	PF12874	1.0E-7	184	207	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003676	Molecular Function	nucleic acid binding
GO:0008270	Molecular Function	zinc ion binding

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence Send to blast
MYPHQQQQQM QHFYPSSNPF LWASEPSIHP PGTDPVPNCS SYLSNSTLSV APSYSYAAPQ 60 STDPQNWIVK QPESVGYDAA VGSSSSMSSS LPLTYDGTWL QQIFTHEEAN QTKGSKSMRC 120 EVCKIDCNSK DVYEKHIFGK KHKKNMQIIA NPMQANVQSQ TSVCSEVKKR KLSNGGAPVD 180 STKVCTICNI VCNSQDVYNK HIAGKKHAAQ VA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016181419.1	1e-144	zinc finger protein 346
Refseq	XP_025682450.1	1e-144	zinc finger protein 346
TrEMBL	A0A444WWF9	1e-154	A0A444WWF9_ARAHY; Uncharacterized protein
STRING	XP_004499491.1	2e-49	(Cicer arietinum)