PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy017061

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

YABBY

Protein Properties

Length: 199aa MW: 22219.1 Da PI: 8.3376

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59522306	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	223.2	7.2e-69	7	169	4	170
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklse 103 + +eq+Cy+ CnfCn +lavsvP +slf +vtvrCGhCt+l svn+a a q l+ ++ ++ + +e + ++n+++n+ ++s+ ++ s + Ahy017061 7 DAGPEQLCYIPCNFCNIVLAVSVPCSSLFDMVTVRCGHCTNLWSVNMAAAFQSLSWQDL---QGPGQCNQEYRI-DTNINMNNGGSSSKCNNSSRLASMR 102 6679*******************************************9999999884...444445555554.5567777666666555555544456 PP YABBY 104 nedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +++v++ v+rPPekrqrvPsayn+fikeeiqrika+nPdishreafs++aknWahfP+ihfgl Ahy017061 103 APTNHVTQERAVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTSAKNWAHFPHIHFGL 169 66778888899****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04690	9.8E-71	10	169	IPR006780	YABBY protein
SuperFamily	SSF47095	2.49E-7	114	162	IPR009071	High mobility group box domain
Gene3D	G3DSA:1.10.30.10	2.9E-4	116	163	IPR009071	High mobility group box domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0007275	Biological Process	multicellular organism development

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence Send to blast
MSSCSMDAGP EQLCYIPCNF CNIVLAVSVP CSSLFDMVTV RCGHCTNLWS VNMAAAFQSL 60 SWQDLQGPGQ CNQEYRIDTN INMNNGGSSS KCNNSSRLAS MRAPTNHVTQ ERAVNRPPEK 120 RQRVPSAYNQ FIKEEIQRIK ANNPDISHRE AFSTSAKNWA HFPHIHFGLM LESNNQANKM 180 DNASEKHLMS RAAPALLNK

Functional Description ? help Back to Top
Source	Description
UniProt	Promotes adaxial cell identity. Regulates the initiation of embryonic shoot apical meristem (SAM) development. {ECO:0000269\|PubMed:19837869}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025630384.1	1e-149	axial regulator YABBY 5 isoform X2
Swissprot	Q8GW46	9e-82	YAB5_ARATH; Axial regulator YABBY 5
TrEMBL	A0A445AW85	1e-147	A0A445AW85_ARAHY; Uncharacterized protein
STRING	GLYMA17G12200.1	1e-120	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26580.2	2e-81	YABBY family protein

Publications ? help Back to Top
Husbands AY,Benkovics AH,Nogueira FT,Lodha M,Timmermans MC The ASYMMETRIC LEAVES Complex Employs Multiple Modes of Regulation to Affect Adaxial-Abaxial Patterning and Leaf Complexity. Plant Cell, 2015. 27(12): p. 3321-35 [PMID:26589551]