PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy017234
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 271aa    MW: 29450.9 Da    PI: 9.6005
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58470247PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-9332PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.81.2e-1371115147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
        Ahy017234  71 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 115
                      789*****************77.*********.*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466897.4E-1765121IPR009057Homeodomain-like
PROSITE profilePS5129415.40866120IPR017930Myb domain
TIGRFAMsTIGR015571.1E-1869118IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.608.3E-769121IPR009057Homeodomain-like
SMARTSM007175.3E-1170118IPR001005SANT/Myb domain
PfamPF002492.0E-1171115IPR001005SANT/Myb domain
CDDcd001671.26E-873116No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MVSVNPNPAQ GFYFFDPSSS NMGLPGVNPM PPPPPPQHAP ATVPSAASSA VNVAEDPSKK  60
IRKPYTITKS RESWTEQEHD KFLEALQLFD RDWKKIEAFV GSKTVIQIRS HAQKYFLKVQ  120
KNGTSEHVPP PRPKRKASHP YPQKAPKSAP TASHVTGPLQ SSSAFIEPAY IYSPDSSSVL  180
GTPVTSVPLS SWNYNTMPPS NVAPSNVPPA TKDDMGLAGA GQAVPLTCCY SSSNENTPPT  240
WPSNNGFEQR NQTKPIKVMP DFAQVYSFIG X
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016179683.10.0protein REVEILLE 5 isoform X2
RefseqXP_025631493.10.0protein REVEILLE 5 isoform X2
SwissprotC0SVG52e-77RVE5_ARATH; Protein REVEILLE 5
TrEMBLA0A445ABQ11e-179A0A445ABQ1_ARAHY; Uncharacterized protein
STRINGGLYMA16G03640.11e-143(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01280.11e-73MYB_related family protein
Publications ? help Back to Top
  1. Gray JA,Shalit-Kaneh A,Chu DN,Hsu PY,Harmer SL
    The REVEILLE Clock Genes Inhibit Growth of Juvenile and Adult Plants by Control of Cell Size.
    Plant Physiol., 2017. 173(4): p. 2308-2322
    [PMID:28254761]