PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy017521

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 711aa MW: 81616.4 Da PI: 6.0135

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59525107	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.2	1.2e-22	101	185	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Yn+YAke+GF +r+++s ++++++e + ++C++eg+++ ++ + ++r+etrtgC a+++++ ++++w+v++++leHnH++ Ahy017521 101 NYYNSYAKEIGFAIRVKSSWTRRNSKEKRGAVLCCNCEGFKTLKEAN-----SHRKETRTGCLAMIRLRSVESNRWRVDEVKLEHNHSFD 185 69**************************************99888.....999******************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.7E-20	101	185	IPR004330	FAR1 DNA binding domain
Pfam	PF10551	1.8E-27	306	400	IPR018289	MULE transposase domain
PROSITE profile	PS50966	9.792	591	629	IPR007527	Zinc finger, SWIM-type
Pfam	PF04434	7.2E-6	603	626	IPR007527	Zinc finger, SWIM-type
SMART	SM00575	2.9E-5	604	631	IPR006564	Zinc finger, PMZ-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0008270	Molecular Function	zinc ion binding

Sequence ? help Back to Top
Protein Sequence Length: 711 aa Download sequence Send to blast
XNNDLNENTV RVCSPSTNDK SFSLTTIDDG SPNSDQLLEV ADEQNILVNG CDQLFEIDGS 60 EHENGRDETT VVDGYAGESQ GKGYPPPVVG MEFDTYDDAY NYYNSYAKEI GFAIRVKSSW 120 TRRNSKEKRG AVLCCNCEGF KTLKEANSHR KETRTGCLAM IRLRSVESNR WRVDEVKLEH 180 NHSFDPERAQ NSKSHKRTDG GSKRKLEPTL DVEVRTIKLY RMPVGDASGY GSPNSNEGGT 240 STNLNFSRHL KLRKGDTELV SNYFCKCQLI NPNFFYVMDL NDDGQLRNIF WIDSRSRAAY 300 SYFGDVVAFD STCLSNNYEI PLVSFVGVNH HGQSILLGCG LLADETFETY NWFFRAWLTC 360 MSGRPPQTVV TNQCNKAMQS AIAEVFPRAH HRICLSQVMQ SILGCLVQFQ EYEAIQMALS 420 RVIYETKTID EFERAWDELT QHFGLRNHEK LQSLYGEREH WAPAYTKDTF FAGISDQEKG 480 ESVVPFFKGH VHQQTSLKEF FEIYELVMEQ KRKTEAIDDF KSRDSSPSLR TRYYYELQLS 540 KLYTNAMFRK VQEEIVMMSS CFGITESQTN GSTATYMVKE SQGEELVQDA GHVEVTYDKT 600 GAEVRCSCCC FNFKGYLCRH ALSILDYNGV EEIPCQYVLP RWRKDFKRLY VPHLTSYNVD 660 ITNPVQCFDH LYKRAMQVVE EGMISQAHYM VSWQAFKESL NKIRLVSDKI E

Sequence ? help Back to Top

Protein Sequence Length: 711 aa Download sequence Send to blast

XNNDLNENTV RVCSPSTNDK SFSLTTIDDG SPNSDQLLEV ADEQNILVNG CDQLFEIDGS  60
EHENGRDETT VVDGYAGESQ GKGYPPPVVG MEFDTYDDAY NYYNSYAKEI GFAIRVKSSW  120
TRRNSKEKRG AVLCCNCEGF KTLKEANSHR KETRTGCLAM IRLRSVESNR WRVDEVKLEH  180
NHSFDPERAQ NSKSHKRTDG GSKRKLEPTL DVEVRTIKLY RMPVGDASGY GSPNSNEGGT  240
STNLNFSRHL KLRKGDTELV SNYFCKCQLI NPNFFYVMDL NDDGQLRNIF WIDSRSRAAY  300
SYFGDVVAFD STCLSNNYEI PLVSFVGVNH HGQSILLGCG LLADETFETY NWFFRAWLTC  360
MSGRPPQTVV TNQCNKAMQS AIAEVFPRAH HRICLSQVMQ SILGCLVQFQ EYEAIQMALS  420
RVIYETKTID EFERAWDELT QHFGLRNHEK LQSLYGEREH WAPAYTKDTF FAGISDQEKG  480
ESVVPFFKGH VHQQTSLKEF FEIYELVMEQ KRKTEAIDDF KSRDSSPSLR TRYYYELQLS  540
KLYTNAMFRK VQEEIVMMSS CFGITESQTN GSTATYMVKE SQGEELVQDA GHVEVTYDKT  600
GAEVRCSCCC FNFKGYLCRH ALSILDYNGV EEIPCQYVLP RWRKDFKRLY VPHLTSYNVD  660
ITNPVQCFDH LYKRAMQVVE EGMISQAHYM VSWQAFKESL NKIRLVSDKI E

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription activator involved in regulating light control of development. May have a role in controlling flowering time. {ECO:0000269\|PubMed:15591448}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269\|PubMed:15591448}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_029147831.1	0.0	protein FAR1-RELATED SEQUENCE 8-like
Swissprot	Q9S793	0.0	FRS8_ARATH; Protein FAR1-RELATED SEQUENCE 8
TrEMBL	A0A371GLZ6	0.0	A0A371GLZ6_MUCPR; Protein FAR1-RELATED SEQUENCE 6 (Fragment)
STRING	GLYMA15G13160.2	0.0	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80010.1	0.0	FAR1-related sequence 8

Publications ? help Back to Top
Joly-Lopez Z, et al. Abiotic Stress Phenotypes Are Associated with Conserved Genes Derived from Transposable Elements. Front Plant Sci, 2017. 8: p. 2027 [PMID:29250089]