PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy017639
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 203aa    MW: 22962.8 Da    PI: 8.8256
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59542079PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H223.31.6e-074769123
               EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
               + C+ Cgk F+r  nL+ H+r H
  Ahy017639 47 HYCSVCGKGFKRDANLRMHMRAH 69
               68*******************99 PP
2zf-C2H2120.00065137160123
                EEETTTT.EEESSHHHHHHHHHHT CS
    zf-C2H2   1 ykCpdCg.ksFsrksnLkrHirtH 23 
                y+C+ C+ k Fs  s+L++H + +
  Ahy017639 137 YVCKRCNqKQFSVLSDLRTHEKHC 160
                9*******************9876 PP
3zf-C2H2110.0013169183620
                TTEEESSHHHHHHHH CS
    zf-C2H2   6 CgksFsrksnLkrHi 20 
                Cg++Fsrk+ L+ H 
  Ahy017639 169 CGTTFSRKDKLMGHV 183
                ************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.54E-64572No hitNo description
Gene3DG3DSA:3.30.160.607.6E-847103IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015712.7364774IPR007087Zinc finger, C2H2
SMARTSM003550.00224769IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002804969IPR007087Zinc finger, C2H2
SMARTSM0035516099132IPR015880Zinc finger, C2H2-like
SMARTSM0035523137159IPR015880Zinc finger, C2H2-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
XTGVDCKVNN NNDDDDPSVE ISDTKEGAKK LDIIELDAAD LLAKYTHYCS VCGKGFKRDA  60
NLRMHMRAHG DEYKTSAALS NPLKQNNNGE NGDCLPKKYS CPQEGCRWNQ KHAKFQPLKS  120
MICAKNHYKR SHCPKMYVCK RCNQKQFSVL SDLRTHEKHC GDLKWQCSCG TTFSRKDKLM  180
GHVALFVGHR ALSIAFHQYN SAA
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. Together with STOP1, plays a critical role in tolerance to major stress factors in acid soils such as proton H(+) and aluminum ion Al(3+). Required for the expression of genes in response to acidic stress (e.g. ALMT1 and MATE), and Al-activated citrate exudation. {ECO:0000269|PubMed:23935008}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025614143.11e-149protein SENSITIVE TO PROTON RHIZOTOXICITY 2
SwissprotQ0WT248e-91STOP2_ARATH; Protein SENSITIVE TO PROTON RHIZOTOXICITY 2
TrEMBLA0A445BW571e-145A0A445BW57_ARAHY; Uncharacterized protein
STRINGXP_004294539.11e-105(Fragaria vesca)