PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy017783
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C3H
Protein Properties Length: 335aa    MW: 36659.8 Da    PI: 8.5283
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59551091PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH34.24.3e-11138162226
                -S---SGGGGTS--TTTTT-SS-SS CS
    zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                +++ C +++ t tCk+Gd+CkF H+
  Ahy017783 138 GEKDCAHYMLTRTCKFGDSCKFDHP 162
                7889********************8 PP
2zf-CCCH31.62.8e-10191215327
                S---SGGGGTS--TTTTT-SS-SSS CS
    zf-CCCH   3 telCrffartGtCkyGdrCkFaHgp 27 
                ++ C++f +t  Ck+G++CkF+H++
  Ahy017783 191 EPDCPYFIKTQRCKFGSKCKFNHPR 215
                789********************96 PP
3zf-CCCH36.67.3e-12231255327
                S---SGGGGTS--TTTTT-SS-SSS CS
    zf-CCCH   3 telCrffartGtCkyGdrCkFaHgp 27 
                ++lC f+ +tG Ck+G++CkF+H++
  Ahy017783 231 EPLCAFYVKTGRCKFGATCKFHHPK 255
                79*********************96 PP
4zf-CCCH40.83.8e-13305328326
                S---SGGGGTS--TTTTT-SS-SS CS
    zf-CCCH   3 telCrffartGtCkyGdrCkFaHg 26 
                ++ C+f+++tG CkyG++C+++H+
  Ahy017783 305 EVDCPFYMKTGSCKYGATCRYNHP 328
                789********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003560.0011136163IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010313.507136164IPR000571Zinc finger, CCCH-type
SuperFamilySSF902292.09E-5137163IPR000571Zinc finger, CCCH-type
PfamPF006428.3E-9138162IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.103.7E-4142161IPR000571Zinc finger, CCCH-type
SMARTSM003564.9E-4188215IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010314.061188216IPR000571Zinc finger, CCCH-type
PfamPF006425.9E-7191215IPR000571Zinc finger, CCCH-type
SuperFamilySSF902291.19E-5192216IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.101.9E-4194215IPR000571Zinc finger, CCCH-type
SMARTSM003564.6E-6228255IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010315.741228256IPR000571Zinc finger, CCCH-type
PfamPF006423.4E-9231255IPR000571Zinc finger, CCCH-type
SuperFamilySSF902292.75E-6231256IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.101.4E-5233254IPR000571Zinc finger, CCCH-type
SMARTSM003563.6E-6302329IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010314.906302330IPR000571Zinc finger, CCCH-type
PfamPF006421.1E-10305328IPR000571Zinc finger, CCCH-type
SuperFamilySSF902298.5E-6305329IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.106.3E-5308327IPR000571Zinc finger, CCCH-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
XLKNGKSKSH VHTYSPTNYR VPNAMFLSHR RDAALRFTSS AATTATDADI GPPGVVSRVS  60
SVTAGPNSSS ASHLLQASSW PAAIAAAAAA ANGGSPALDL KRSSEFGQSE AWYSTNSLAK  120
RPRYESGSNL PIYPQRPGEK DCAHYMLTRT CKFGDSCKFD HPIWVPDGGI PDWKEISNTV  180
SSETLPERIG EPDCPYFIKT QRCKFGSKCK FNHPRSSENG DISALPERPS EPLCAFYVKT  240
GRCKFGATCK FHHPKDIQIL TSDELSYNAE QTQENSIREG ATGDTQSFLS PLLHNSKGLP  300
VRMGEVDCPF YMKTGSCKYG ATCRYNHPDR NAIYP
Functional Description ? help Back to Top
Source Description
UniProtInvolved in flower development (PubMed:11595801, PubMed:12530963). Functions in floral reproductive organ identity by binding AGAMOUS (AG) pre-mRNA and promoting its processing. Functions in association with HUA2 and HEN4 (PubMed:12530963). {ECO:0000269|PubMed:11595801, ECO:0000269|PubMed:12530963}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015936931.10.0zinc finger CCCH domain-containing protein 37 isoform X2
RefseqXP_025615099.10.0zinc finger CCCH domain-containing protein 37 isoform X2
SwissprotQ941Q31e-110C3H37_ARATH; Zinc finger CCCH domain-containing protein 37
TrEMBLA0A445BZ940.0A0A445BZ94_ARAHY; Uncharacterized protein
STRINGXP_004517027.11e-154(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12680.11e-108floral homeotic protein (HUA1)