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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Ahy017973 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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| Family | WRKY | ||||||||
| Protein Properties | Length: 348aa MW: 37368.6 Da PI: 7.3092 | ||||||||
| Description | WRKY family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | WRKY | 98.3 | 5.1e-31 | 80 | 138 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+Dg++WrKYGqK+ kg++ pr+YYrCt+a gCpv+k+v+r+aed +v+++tYeg+Hnh+
Ahy017973 80 SDGCQWRKYGQKMAKGNPSPRAYYRCTMAaGCPVRKQVQRCAEDSTVLITTYEGNHNHP 138
7***************************99****************************7 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Gene3D | G3DSA:2.20.25.80 | 1.6E-33 | 64 | 140 | IPR003657 | WRKY domain |
| SuperFamily | SSF118290 | 8.11E-28 | 72 | 140 | IPR003657 | WRKY domain |
| PROSITE profile | PS50811 | 30.71 | 74 | 140 | IPR003657 | WRKY domain |
| SMART | SM00774 | 5.0E-37 | 79 | 139 | IPR003657 | WRKY domain |
| Pfam | PF03106 | 4.5E-27 | 81 | 138 | IPR003657 | WRKY domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 348 aa Download sequence Send to blast |
XHDENDDHNE DDEDRLTKLH LGKQVAASAT EEDVLERSSS QSWGSCKTPN LEETKLPSSD 60 LPFRKARVSV RARSEAPLIS DGCQWRKYGQ KMAKGNPSPR AYYRCTMAAG CPVRKQVQRC 120 AEDSTVLITT YEGNHNHPLP PAATAMANTT SAAAAMLLSG STSSSSKETL AASAGYFSSS 180 MPYTSMATLS ASAPFPTITL DLTHNHHNAL QLHRVVPPPG VTFPLPLHAV TPPHQLIAGH 240 PFLISHHQKL MPPLVHRQQP QPSNNSPSMV ETVSAAIASD PNFTAAVAAA LSSIIGSSNN 300 GGSASTVIHP NAISVSPEWI TATSSVMYYI LYQLASSIQH DTCHRYPA |
| 3D Structure ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
| 2ayd_A | 1e-21 | 66 | 142 | 1 | 76 | WRKY transcription factor 1 |
| Search in ModeBase | ||||||
| Functional Description ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Description | |||||
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}. | |||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_016205681.1 | 0.0 | probable WRKY transcription factor 47 isoform X2 | ||||
| Refseq | XP_020959602.1 | 0.0 | probable WRKY transcription factor 47 isoform X1 | ||||
| Refseq | XP_025661770.1 | 0.0 | probable WRKY transcription factor 47 | ||||
| Swissprot | Q9XEC3 | 2e-72 | WRK42_ARATH; WRKY transcription factor 42 | ||||
| TrEMBL | A0A444YJ92 | 0.0 | A0A444YJ92_ARAHY; Uncharacterized protein | ||||
| STRING | GLYMA19G40950.2 | 1e-124 | (Glycine max) | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G01720.1 | 1e-60 | WRKY family protein | ||||




