PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy018168
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 559aa    MW: 60538.7 Da    PI: 5.175
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59556011PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-8627PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.79e-32272329260
                --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                +DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvk kvers+ +++++ei+Y+g Hnh+k
  Ahy018168 272 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKMKVERSH-EGHITEIIYKGAHNHPK 329
                7****************************************.***************85 PP
2WRKY102.62.2e-32488546159
                ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                ldDgy+WrKYGqK+vkg+++prsYY+Ct agC+v+k+ver+++d k v++tYeg+Hnh+
  Ahy018168 488 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERESHDLKSVITTYEGKHNHD 546
                59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.8E-28270330IPR003657WRKY domain
SuperFamilySSF1182906.93E-25270330IPR003657WRKY domain
SMARTSM007749.2E-35271329IPR003657WRKY domain
PfamPF031063.4E-24272328IPR003657WRKY domain
PROSITE profilePS5081122.71272330IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.1E-37473548IPR003657WRKY domain
SuperFamilySSF1182902.09E-28480548IPR003657WRKY domain
PROSITE profilePS5081138.124483548IPR003657WRKY domain
SMARTSM007743.7E-37488547IPR003657WRKY domain
PfamPF031067.8E-25489546IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 559 aa     Download sequence    Send to blast
MAGIDENVGV PGDWSGPSPS PRTFFSVMLG EDNVARSMSD PPPGGDGAQD GDQKLVSRGG  60
LVERMAARAG FNAPRLNTDT IRSTDLSLNS DVPSPYLTIP PGLSPTTLLD SPVFLTNSLA  120
QPSPTTGKFP FISNGNISSN APERCKDNSF DDIYASSFAF KPTTDLGSSF YQGAARKMNP  180
TTIAQQSLPG VEVPVQSEHS FQSRSADVVK SQTQNKNGLH LQPDFIESSP QQDTVGVSLE  240
HSPQLEEQAD EEGEPRGNGD SMAAGFGGAP SEDGYNWRKY GQKQVKGSEY PRSYYKCTHP  300
NCPVKMKVER SHEGHITEII YKGAHNHPKP PPNRRSGIAS ANPPSDMQMD NPEHVERQSG  360
SDGELGWANL QKGNVAGAAN WKNDNLEVTS STSVAPEYCN QSTNSQAQNG TQFDSGDAVD  420
ASSTFSNEDD DDDRGTHGSV SLGYDGEGDE SESKRRKLES YATELSGATR AIREPRVVVQ  480
TTSEVDILDD GYRWRKYGQK VVKGNPNPRS YYKCTNAGCT VRKHVERESH DLKSVITTYE  540
GKHNHDVPAA RSSSHVNAX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A7e-36272549878Probable WRKY transcription factor 4
2lex_A7e-36272549878Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Regulates WOX8 and WOX9 expression and basal cell division patterns during early embryogenesis. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Required to repolarize the zygote from a transient symmetric state. {ECO:0000269|PubMed:21316593}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025702391.10.0probable WRKY transcription factor 2
RefseqXP_025702392.10.0probable WRKY transcription factor 2
SwissprotQ9FG770.0WRKY2_ARATH; Probable WRKY transcription factor 2
TrEMBLA0A445CY660.0A0A445CY66_ARAHY; Uncharacterized protein
STRINGXP_007148682.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.10.0WRKY DNA-binding protein 2
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Ueda M, et al.
    Transcriptional integration of paternal and maternal factors in the Arabidopsis zygote.
    Genes Dev., 2017. 31(6): p. 617-627
    [PMID:28404632]
  4. Lei R, et al.
    Arabidopsis WRKY2 and WRKY34 transcription factors interact with VQ20 protein to modulate pollen development and function.
    Plant J., 2017. 91(6): p. 962-976
    [PMID:28635025]