PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy018468

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

ARR-B

Protein Properties

Length: 469aa MW: 52450.4 Da PI: 6.1675

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59547286	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	34.1	5.9e-11	301	329	1	30
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPk 30 k +++WtpeLH++Fv+aveqL G ++A+P+ Ahy018468 301 KMKIDWTPELHKKFVKAVEQL-GLDQAIPS 329 5689***************.9***97 PP
2	G2-like	57.7	2.5e-18	341	380	16	56
G2-like 16 eaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 +aveqL G ++A+P++i++lmkv+gLt+++v+SHLQkYR++ Ahy018468 341 KAVEQL-GLDQAIPSRIMDLMKVEGLTRHNVASHLQKYRMH 380 7***.******************************96 PP
3	Response_reg	24.5	1.4e-09	21	126	2	109
EEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT.SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 2 livdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg.mdGlellkeireeepklpiivvtahgeeedalealkaGak 95 l+ + + + + ++ le +y +v ++ d eal + + +++ ++ +++ G+++l++ + ++lp i+ + +++ +++ +Ga Ahy018468 21 LLLEGDATSAAEIKPKLEAMDY-NVSAFCDENEALSAISSRSesFHIAIVEVSINSgQGGFKFLEN---A-KDLPTIMTSNDHCLSTMMKCIALGAV 112 55566666667777789999.***********665556*****9986778887764...3.3799999999889********* PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 +fl Kp ++++l++ Ahy018468 113 EFLHKPLSEDKLRN 126 *********987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF52172	8.4E-15	16	135	IPR011006	CheY-like superfamily
Gene3D	G3DSA:3.40.50.2300	2.4E-16	16	156	No hit	No description
SMART	SM00448	0.003	18	128	IPR001789	Signal transduction response regulator, receiver domain
PROSITE profile	PS50110	19.194	19	132	IPR001789	Signal transduction response regulator, receiver domain
Pfam	PF00072	3.9E-8	20	127	IPR001789	Signal transduction response regulator, receiver domain
CDD	cd00156	1.69E-8	21	131	No hit	No description
Gene3D	G3DSA:1.10.10.60	9.0E-9	299	328	IPR009057	Homeodomain-like
SuperFamily	SSF46689	2.33E-9	341	383	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	3.7E-17	341	383	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	8.5E-16	341	381	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0000160	Biological Process	phosphorelay signal transduction system
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence Send to blast
MVCTVNDLQQ WKDFPKGLKV LLLEGDATSA AEIKPKLEAM DYNVSAFCDE NEALSAISSR 60 SESFHIAIVE VSINSGQGGF KFLENAKDLP TIMTSNDHCL STMMKCIALG AVEFLHKPLS 120 EDKLRNIWQH VVHKAFNASA SVMSESLKPV KESVVSMLQL QTDNEQQEST YTDDDPDPGS 180 DKYPAPSTPQ LNQGSRLMDD GDCQEQTNCS TEKESGEHDG EGESKSVETT CGNLNFESNN 240 TNEPMNTEKT LVKNLREDSR DGNHDSSVYK HTNDKVLSSD DGNTKSSNKV DSCTLKAHRK 300 KMKIDWTPEL HKKFVKAVEQ LGLDQAIPSX NIGSNESGGM KAVEQLGLDQ AIPSRIMDLM 360 KVEGLTRHNV ASHLQKYRMH KRQILPKEEG RKWLNQRDQM QRSYCLQQRP IMAFPPPNHS 420 NHTLSPAPIY PMWRQSGGQA AAMPVWGPPG YPLWHPTESW HWKPLPGLX

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence Send to blast

MVCTVNDLQQ WKDFPKGLKV LLLEGDATSA AEIKPKLEAM DYNVSAFCDE NEALSAISSR  60
SESFHIAIVE VSINSGQGGF KFLENAKDLP TIMTSNDHCL STMMKCIALG AVEFLHKPLS  120
EDKLRNIWQH VVHKAFNASA SVMSESLKPV KESVVSMLQL QTDNEQQEST YTDDDPDPGS  180
DKYPAPSTPQ LNQGSRLMDD GDCQEQTNCS TEKESGEHDG EGESKSVETT CGNLNFESNN  240
TNEPMNTEKT LVKNLREDSR DGNHDSSVYK HTNDKVLSSD DGNTKSSNKV DSCTLKAHRK  300
KMKIDWTPEL HKKFVKAVEQ LGLDQAIPSX NIGSNESGGM KAVEQLGLDQ AIPSRIMDLM  360
KVEGLTRHNV ASHLQKYRMH KRQILPKEEG RKWLNQRDQM QRSYCLQQRP IMAFPPPNHS  420
NHTLSPAPIY PMWRQSGGQA AAMPVWGPPG YPLWHPTESW HWKPLPGLX

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. {ECO:0000250}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025627513.1	0.0	two-component response regulator-like APRR2 isoform X3
Swissprot	Q6LA43	1e-125	APRR2_ARATH; Two-component response regulator-like APRR2
TrEMBL	A0A445ARL5	0.0	A0A445ARL5_ARAHY; Uncharacterized protein
STRING	XP_004508999.1	0.0	(Cicer arietinum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.5	1e-127	ARR-B family protein

Publications ? help Back to Top
Gong L, et al. Transcriptome Profiling of the Potato (Solanum tuberosum L.) Plant under Drought Stress and Water-Stimulus Conditions. PLoS ONE, 2015. 10(5): p. e0128041 [PMID:26010543]