PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy018635
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 219aa    MW: 24038.7 Da    PI: 6.6793
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59553074PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.49.9e-203383155
        AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               ++++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa+++++g
  Ahy018635 33 TRFRGVRKRP-WGRFAAEIRDpWK----KARVWLGTFDSAEDAARAYDAAARSFRG 83
               589*******.**********883....5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.3E-123383IPR001471AP2/ERF domain
CDDcd000183.53E-183391No hitNo description
SMARTSM003803.3E-353497IPR001471AP2/ERF domain
PROSITE profilePS5103223.5253491IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.6E-313491IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-223492IPR016177DNA-binding domain
PRINTSPR003674.0E-103546IPR001471AP2/ERF domain
PRINTSPR003674.0E-105773IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MRRGRDAVAV AAAAVAADPT HPNADSRNNV GETRFRGVRK RPWGRFAAEI RDPWKKARVW  60
LGTFDSAEDA ARAYDAAARS FRGPKAKTNF PFPNAEIGIS HSQIPIHGYD DPVHGFGKYE  120
PVQVNRPTSS GMSSTVESFS GPRVSSTAAL PAVDRRRRKP EKPVVVPVDD CHSDCDSSST  180
IDDEDSFRKT LTFDLNLPPP EEDDVGFTDE EIRATALCL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-193592664ATERF1
3gcc_A1e-193592664ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1153159DRRRRKP
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways and could also regulate other AtERFs. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:11487705, ECO:0000269|PubMed:9756931}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by jasmonate (JA), ethylene and Alternaria brassicicola (locally and systemically). Moderate induction by wounding or drought stress does not require EIN2, whereas induction by NaCl does. Transcripts accumulate slightly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by ethylene, exogenous abscisic acid (ABA), cold and heat stress. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:12805630}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015973690.11e-159ethylene-responsive transcription factor 3
RefseqXP_025609027.11e-159ethylene-responsive transcription factor 3
SwissprotO803395e-41ERF82_ARATH; Ethylene-responsive transcription factor 3
TrEMBLA0A445C4T21e-158A0A445C4T2_ARAHY; Uncharacterized protein
STRINGXP_007141662.16e-77(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.18e-29ethylene responsive element binding factor 3
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]