PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy018844
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HD-ZIP
Protein Properties Length: 843aa    MW: 92336.6 Da    PI: 6.3331
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59559147PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.41.2e-182179357
               --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
   Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
               k  ++t+eq+e+Le+l++++++ps  +r++L + +    +++ +q+kvWFqNrR +ek+
  Ahy018844 21 KYVRYTPEQVEALERLYHECPKPSSLRRQQLIRDCpilsNIEPKQIKVWFQNRRCREKQ 79
               5679*****************************************************97 PP
2START173.11.7e-541673752205
                HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXXT CS
      START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvaelq 99 
                +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  ++a  v+e+l+d++ W ++++ +++l+v s+g  g+++l +++l+
  Ahy018844 167 IAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPA-RVAEILKDRLSWYRDCRTVDVLNVMSTGngGTIELLYMQLY 265
                7899******************************************************.9999999999******************************* PP

                TXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHH CS
      START 100 alsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaegakt 195
                a+++l+p Rdf+ +Ry+  l++g++v++++S++++q+ p     +++vRa + pSg+li+p+++g+s +++v+h+ l+ ++++++lr+l++s++  +++t
  Ahy018844 266 APTTLAPgRDFWLLRYTSLLEDGSLVVCERSLNNTQNGPAmpaVQHFVRADMMPSGYLIRPCEGGGSIIHIVDHIILEPWSVPEVLRPLYESSMLLAQRT 365
                ***************************************999999******************************************************* PP

                HHHHTXXXXX CS
      START 196 wvatlqrqce 205
                ++a+l+++++
  Ahy018844 366 TMAALRHLRQ 375
                *****99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.9E-18579IPR009057Homeodomain-like
PROSITE profilePS5007115.4351680IPR001356Homeobox domain
SMARTSM003894.0E-151884IPR001356Homeobox domain
SuperFamilySSF466891.03E-162084IPR009057Homeodomain-like
CDDcd000866.73E-162181No hitNo description
PfamPF000463.1E-162279IPR001356Homeobox domain
CDDcd146861.15E-673112No hitNo description
PROSITE profilePS5084823.795157385IPR002913START domain
CDDcd088753.73E-75161376No hitNo description
SMARTSM002346.7E-40166376IPR002913START domain
SuperFamilySSF559618.65E-34166377No hitNo description
Gene3DG3DSA:3.30.530.201.1E-18166372IPR023393START-like domain
PfamPF018521.0E-51167375IPR002913START domain
PfamPF086701.5E-50702842IPR013978MEKHLA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 843 aa     Download sequence    Send to blast
MAVSSGSKEG GGSKVMMDNG KYVRYTPEQV EALERLYHEC PKPSSLRRQQ LIRDCPILSN  60
IEPKQIKVWF QNRRCREKQR KEASRLQAVN RKLTAMNKLL MEENDRLQKQ VSHLVYENTF  120
FRQHTQQNQA ALATTDTSCE SVVTSGQRNL TPQHPPRDAS PAGLLSIAEE TLAEFLSKAT  180
GTAVEWVQMP GMKPGPDSIG IVAISHGCPG VAARACGLVG LEPARVAEIL KDRLSWYRDC  240
RTVDVLNVMS TGNGGTIELL YMQLYAPTTL APGRDFWLLR YTSLLEDGSL VVCERSLNNT  300
QNGPAMPAVQ HFVRADMMPS GYLIRPCEGG GSIIHIVDHI ILEPWSVPEV LRPLYESSML  360
LAQRTTMAAL RHLRQISQEV SQPSVTGWGR RPAALRALSQ RLSKGFNEAV NGFTDDGWSL  420
LESDGIDDVT LLVNSSPSKM MGANLGYNGG GFASVTSSVL CAKASMLLQN VPPAILLRFL  480
REHRSEWADS SIDAYSAAAI KAGPCNLPGV RAGGFGGQVI LPLAHTIEHE EFMEVIKLEN  540
MGYYRDDMTI PGDVFLLQLC SGVDENAVGT SAELIFAPID ASFSDDAPIL PSGFRIIPLD  600
STSDAASPNR TLDLASALEV GTAGSKAGGE NSSHSGSTKS VMTIAFQFAF EVHLQDNIAT  660
MARQYVRSII ASVQRVSLAL SPSRFGSQNA FHLPPGTPEA QTLARWISSS YRFYLGVELL  720
KSEGSEPILK SLWHHTDAVL CCSLKALPVF TFANQAGLDM LETTLVALQD ITLEKIFDDN  780
GKKTLCSEFP QIMQQGFMCI QGGICLSSMG RPVSYERAVA WKVLNEEETA HCICFMFINW  840
SFV
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in the regulation of vascular development. May promote differentiation of precambial and cambial cells. {ECO:0000269|PubMed:11402194, ECO:0000269|PubMed:15598805}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By auxin. Repressed by miR165. {ECO:0000269|PubMed:17237362, ECO:0000269|PubMed:8575317}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015945672.10.0homeobox-leucine zipper protein ATHB-8
SwissprotQ391230.0ATHB8_ARATH; Homeobox-leucine zipper protein ATHB-8
TrEMBLA0A445B4N90.0A0A445B4N9_ARAHY; Uncharacterized protein
STRINGGLYMA06G09100.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32880.10.0homeobox gene 8
Publications ? help Back to Top
  1. Heyndrickx KS,Vandepoele K
    Systematic identification of functional plant modules through the integration of complementary data sources.
    Plant Physiol., 2012. 159(3): p. 884-901
    [PMID:22589469]
  2. Hategan L,Godza B,Kozma-Bognar L,Bishop GJ,Szekeres M
    Differential expression of the brassinosteroid receptor-encoding BRI1 gene in Arabidopsis.
    Planta, 2014. 239(5): p. 989-1001
    [PMID:24488524]
  3. Baima S, et al.
    Negative feedback regulation of auxin signaling by ATHB8/ACL5-BUD2 transcription module.
    Mol Plant, 2014. 7(6): p. 1006-1025
    [PMID:24777988]
  4. Kakehi J, et al.
    Mutations in ribosomal proteins, RPL4 and RACK1, suppress the phenotype of a thermospermine-deficient mutant of Arabidopsis thaliana.
    PLoS ONE, 2015. 10(1): p. e0117309
    [PMID:25625317]
  5. Jia X, et al.
    Functional plasticity of miR165/166 in plant development revealed by small tandem target mimic.
    Plant Sci., 2015. 233: p. 11-21
    [PMID:25711809]
  6. Liu S, et al.
    Expression of wild-type PtrIAA14.1, a poplar Aux/IAA gene causes morphological changes in Arabidopsis.
    Front Plant Sci, 2015. 6: p. 388
    [PMID:26082787]
  7. Yamaguchi YL, et al.
    Root-Knot and Cyst Nematodes Activate Procambium-Associated Genes in Arabidopsis Roots.
    Front Plant Sci, 2017. 8: p. 1195
    [PMID:28747918]
  8. Yamazaki K, et al.
    Suppression of DELLA signaling induces procambial cell formation in culture.
    Plant J., 2018. 94(1): p. 48-59
    [PMID:29383774]