PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy018850
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 540aa    MW: 58468.1 Da    PI: 5.112
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59542604PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.7e-13391437455
                HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                +h e+Er+RR+++N++f  Lr ++P+ +      K++Ka+ L  A+ YI +Lq
  Ahy018850 391 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITDLQ 437
                799***********************66......*****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142152.3E-4153239IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088816.831387436IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.45E-18390452IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.16E-14390441No hitNo description
PfamPF000103.2E-10391437IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.9E-18391450IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.2E-14393442IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 540 aa     Download sequence    Send to blast
MSEKFCVSDE DKGVLESVLG AEAVAYFVSA VSNNFFSSVV ASASALAGTD AGLRRRLCQV  60
LEGSKWNYAV FWQVAGLKSG GSALIWGDGQ CCDPKGGGAG EGGSEGDWSG VSKGDEEELR  120
KKVLQKLDAY FACSVSKEAN YARLDRVSDL HMFYLASMYY IFGFDSPCGP GCSFKSGKSI  180
WVSDSASCSN QLESRSFLGR SAGLQTVVFV PLKAGVVELG SVETVPEDQG VLDLVRTAFG  240
ESSSGQAKAF PKIFGRELSV GGGDAKSQSI TISFSPKLED DSGFTSDSYE VQALAANHGY  300
GNPSNGSMGE NSEAKLFPQM IGGNYNAQTR VSSLDLGNEX LLLDSFGNYN AQTRVSSLDL  360
GNEDSSSTHL DERKPRKRGR KPANGREEPL NHVEAERQRR EKLNQRFYAL RAVVPNISKM  420
DKASLLGDAI TYITDLQMKI KVLETEKNMN NNNEPMFPFS DIDFQAREDD TAVVRVSCPL  480
DLHPVSRVIK TFQEHQIMAP ESGVSTSEGK MIHTFSIRAQ GSEAAAIQLK EKLEASLSKN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5gnj_A2e-27385447264Transcription factor MYC2
5gnj_B2e-27385447264Transcription factor MYC2
5gnj_E2e-27385447264Transcription factor MYC2
5gnj_F2e-27385447264Transcription factor MYC2
5gnj_G2e-27385447264Transcription factor MYC2
5gnj_I2e-27385447264Transcription factor MYC2
5gnj_M2e-27385447264Transcription factor MYC2
5gnj_N2e-27385447264Transcription factor MYC2
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1372380RKPRKRGRK
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that negatively regulates jasmonate (JA) signaling (PubMed:30610166). Negatively regulates JA-dependent response to wounding, JA-induced expression of defense genes, JA-dependent responses against herbivorous insects, and JA-dependent resistance against Botrytis cinerea infection (PubMed:30610166). Plays a positive role in resistance against the bacterial pathogen Pseudomonas syringae pv tomato DC3000 (PubMed:30610166). {ECO:0000269|PubMed:30610166}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding, feeding with herbivorous insects, infection with the fungal pathogen Botrytis cinerea and infection with the bacterial pathogen Pseudomonas syringae pv tomato DC3000. {ECO:0000269|PubMed:30610166}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015948475.10.0transcription factor bHLH3
RefseqXP_025643824.10.0transcription factor bHLH3
SwissprotA0A3Q7H2161e-169MTB3_SOLLC; Transcription factor MTB3
TrEMBLA0A445EFI80.0A0A445EFI8_ARAHY; Uncharacterized protein
STRINGGLYMA13G18131.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16430.11e-135bHLH family protein
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]
  2. Sun H,Fan HJ,Ling HQ
    Genome-wide identification and characterization of the bHLH gene family in tomato.
    BMC Genomics, 2015. 16: p. 9
    [PMID:25612924]
  3. Liu Y, et al.
    MYC2 Regulates the Termination of Jasmonate Signaling via an Autoregulatory Negative Feedback Loop.
    Plant Cell, 2019. 31(1): p. 106-127
    [PMID:30610166]