PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy018875
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 470aa    MW: 52948 Da    PI: 9.6398
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58466406PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.77.2e-15337381347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
        Ahy018875 337 PWTEEEHRLFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 381
                      8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5029426.8671207IPR017986WD40-repeat-containing domain
SuperFamilySSF509782.01E-438198IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.102.5E-458199IPR015943WD40/YVTN repeat-like-containing domain
SMARTSM003202.4E-72968IPR001680WD40 repeat
PfamPF004004.1E-53468IPR001680WD40 repeat
PROSITE profilePS5008213.5833677IPR001680WD40 repeat
PROSITE profilePS500903.89267116IPR017877Myb-like domain
SMARTSM003202.0E-471113IPR001680WD40 repeat
PfamPF004005.7E-473113IPR001680WD40 repeat
PROSITE patternPS006780100114IPR019775WD40 repeat, conserved site
SMARTSM00320190116156IPR001680WD40 repeat
SMARTSM003202.4E-7159198IPR001680WD40 repeat
PfamPF004001.9E-4163198IPR001680WD40 repeat
PROSITE profilePS5008214.452166199IPR001680WD40 repeat
PROSITE patternPS006780185199IPR019775WD40 repeat, conserved site
Gene3DG3DSA:1.10.10.608.8E-13328387IPR009057Homeodomain-like
PROSITE profilePS5129420.858330386IPR017930Myb domain
SuperFamilySSF466893.09E-17331385IPR009057Homeodomain-like
TIGRFAMsTIGR015572.4E-17333385IPR006447Myb domain, plants
SMARTSM007171.7E-13334384IPR001005SANT/Myb domain
PfamPF002492.9E-12337381IPR001005SANT/Myb domain
CDDcd001671.29E-10337382No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    Send to blast
XWNRKGLNSR ILASGSRDRN ILQHDMRVSN DYISQLVGHK SEVCGLKWSS DDRELASGGN  60
DNQLLVWNHH SQQPILRLTE HTAAVKAIAW SPHQSNLLTS GGGTADRCIR FWNTSNGHQL  120
NCIDSGSQVC NLAWSKNVNE LVSTHGYSQN QIMVWKYPSL AKVATLTGHS MRVLYLAMSP  180
DGQTIVTGAG DETLRFWNVF PSVKAPAPVK DSXALVTGTY TDSLRKRNYN TTNYHCIFLL  240
MRYLHELCVL MLVINYLYLC EEKXKKKGPP RPLCVDTTAC WNRKGLNSNP LVPTSSGINA  300
ECITAGELDG FKQFYGVGCK RGSSTRPSEQ ERKKGVPWTE EEHRLFLMGL KKYGKGDWRN  360
ISRNFVTTRT PTQVASHAQK YFIRQLNGGK DKRRSSIHDI TMVNLPETKS PSSESNKPPS  420
PDANLNQNQK LLSSMVKQEY DWKSPPYEGV PLVFDSTNGN SFMTLWWSLX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4ui9_R1e-958205280478FIZZY-RELATED PROTEIN HOMOLOG
5l9t_R1e-958205280478Fizzy-related protein homolog
5l9u_R1e-958205280478Fizzy-related protein homolog
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-50MYB family protein