PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy018914
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HD-ZIP
Protein Properties Length: 829aa    MW: 91460.5 Da    PI: 6.6288
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59553152PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-25798PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.72e-181674357
               --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
   Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
               k  ++t+eq+e+Le+l++ +++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  Ahy018914 16 KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 74
               5679*****************************************************97 PP
2START167.21.2e-521603512188
                HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXXT CS
      START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvaelq 99 
                +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++++++l+v+ ++  g+++l +++l+
  Ahy018914 160 IAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPT-RVAEILKDRPSWFRDCRAVDVLNVLPTAngGTIELLYMQLY 258
                7899******************************************************.8888888888****************9999*********** PP

                TXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHH CS
      START 100 alsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksg 188
                a+++l+p Rdf+ +Ry+  l++g++vi+++S+ ++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l++s+
  Ahy018914 259 APTTLAPaRDFWLLRYTSMLEDGSLVICERSLKNTQNGPTmppVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESS 351
                **************************************9998899*********************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007115.4021175IPR001356Homeobox domain
SuperFamilySSF466895.56E-171378IPR009057Homeodomain-like
SMARTSM003892.4E-151379IPR001356Homeobox domain
CDDcd000861.29E-161676No hitNo description
PfamPF000465.8E-161774IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.603.4E-181874IPR009057Homeodomain-like
CDDcd146862.69E-668107No hitNo description
PROSITE profilePS5084825.437150351IPR002913START domain
CDDcd088755.24E-74154351No hitNo description
Gene3DG3DSA:3.30.530.204.8E-22159342IPR023393START-like domain
SMARTSM002341.3E-34159379IPR002913START domain
SuperFamilySSF559613.02E-37159355No hitNo description
PfamPF018523.6E-50160351IPR002913START domain
PfamPF086708.5E-42704828IPR013978MEKHLA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 829 aa     Download sequence    Send to blast
MSMSCKDGKP GLDNGKYVRY TPEQVEALER LYHDCPKPSS IRRQQLIREC PILSNIEPKQ  60
IKVWFQNRRC REKQRKEALR LQAVNRKLTA MNKLLMEEND RLQKQVSQLV YENGYFRQHT  120
QNTSLPTKDT SCESAVTSGQ RSLTNQHPPR DASPAGLLSI AEETLAEFLS KATGTAVEWV  180
QMPGMKPGPD SIGIVAISHG CTGVAARACG LVGLEPTRVA EILKDRPSWF RDCRAVDVLN  240
VLPTANGGTI ELLYMQLYAP TTLAPARDFW LLRYTSMLED GSLVICERSL KNTQNGPTMP  300
PVQHFVRAEM LPSGYLIRPC EGGGSIIHIV DHMDLEPWSV PEVLRPLYES SXELQYYKKD  360
VCIVYIVHSI QALRQLRQIS HEVSQSNVTG WGRRPAALRA LGQRLSRGFN EALNGFTDEG  420
WSTIGNDGVD DVTILVNSSP DKLMGLNLSF ANGFPSVSNA VLCAKASMLL QNVPPAILLR  480
FLREHRSEWA DNNMDAYSAA AIKVGPCSLS GSRVGNYGGQ VILPLAHTIE HEEFLEVIKL  540
EGIAHSPEEA MMPREVFLLQ LCSGMDENAV GTCAELIFAP IDASFADDAP LLPSGFRIIP  600
LDSGKEASNP NRTLDLASAL DIGPTGNRAS NETSGNSGSV RSVMTIAFEF AFESHMQEHV  660
ASMARQYVRS IISSVQRVAL ALSPSHLSSQ AGLRTPLGTP EAQTLARWIC NSYRCYLGVE  720
LLKSNNEGNE SLLKSLWHHS DALLCCTLKA LPVFTFANQA GLDMLETTLV ALQDITLEKI  780
FDDHGRKILC SEFPQIIQQG FACLQGGICL SSMGRPISYE RVVAWKVLC
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in the regulation of meristem development to promote lateral organ formation. May regulates procambial and vascular tissue formation or maintenance, and vascular development in inflorescence stems. {ECO:0000269|PubMed:15598805, ECO:0000269|PubMed:15705957, ECO:0000269|PubMed:16617092}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By auxin. Repressed by miR165 and miR166. {ECO:0000269|PubMed:15773855, ECO:0000269|PubMed:16033795, ECO:0000269|PubMed:16617092, ECO:0000269|PubMed:17237362}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025610204.10.0homeobox-leucine zipper protein ATHB-15
SwissprotQ9ZU110.0ATB15_ARATH; Homeobox-leucine zipper protein ATHB-15
TrEMBLA0A444Y8Z60.0A0A444Y8Z6_ARAHY; Uncharacterized protein
TrEMBLA0A445CFJ10.0A0A445CFJ1_ARAHY; Uncharacterized protein
STRINGXP_007150614.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein
Publications ? help Back to Top
  1. Yamada T,Sasaki Y,Hashimoto K,Nakajima K,Gasser CS
    CORONA, PHABULOSA and PHAVOLUTA collaborate with BELL1 to confine WUSCHEL expression to the nucellus in Arabidopsis ovules.
    Development, 2016. 143(3): p. 422-6
    [PMID:26700684]