PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy019042

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

HD-ZIP

Protein Properties

Length: 338aa MW: 37748.5 Da PI: 4.4823

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S58447191	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.7	9.6e-19	61	114	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe ++++ +++ +LA++lgL+ rqV vWFqNrRa++k Ahy019042 61 KKRRLSVEQVKALEKNFEVENKLEPDRKVKLAQELGLQPRQVAVWFQNRRARWK 114 456899***********************************************9 PP
2	HD-ZIP_I/II	130.3	7.6e-42	60	151	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrls eqvk+LE++Fe e+kLep+rKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy +Lk++y+alk + e+L++++++L++e+k Ahy019042 60 EKKRRLSVEQVKALEKNFEVENKLEPDRKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYEALKLNFEKLQQDNQALHKEIK 151 69**************************************************************************************9997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	9.84E-20	44	118	IPR009057	Homeodomain-like
PROSITE profile	PS50071	17.378	56	116	IPR001356	Homeobox domain
SMART	SM00389	2.7E-18	59	120	IPR001356	Homeobox domain
Pfam	PF00046	7.2E-16	61	114	IPR001356	Homeobox domain
CDD	cd00086	1.44E-16	61	117	No hit	No description
Gene3D	G3DSA:1.10.10.60	4.5E-20	63	123	IPR009057	Homeodomain-like
PRINTS	PR00031	9.9E-6	87	96	IPR000047	Helix-turn-helix motif
PROSITE pattern	PS00027	0	91	114	IPR017970	Homeobox, conserved site
PRINTS	PR00031	9.9E-6	96	112	IPR000047	Helix-turn-helix motif
Pfam	PF02183	1.3E-17	116	158	IPR003106	Leucine zipper, homeobox-associated

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence Send to blast
MKRLSSSDDS LGALMTICPS STTEEHSPRN KQQVYGREFQ SMLDGLDEDG CIEESGHHGE 60 KKRRLSVEQV KALEKNFEVE NKLEPDRKVK LAQELGLQPR QVAVWFQNRR ARWKTKQLER 120 DYGVLKANYE ALKLNFEKLQ QDNQALHKEI KGLKSRMQDE RTESDASVKK EQVEMITTLQ 180 DSEENPCDLE TAAAIAGSDS NKDLSYDCFN KGDGEGGDGV GGAASISLFP CGDLKDGSSD 240 SDSSAILNEE NNNSSCSPMN NAAMSSCGGG VLQSSNLLMS QHDESPSSMS CFQFQKAYQA 300 TQYVKMEEHN FFSADETCNF FSDEQAPTLQ WYCSEEWS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	108	116	RRARWKTKQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025691102.1	0.0	homeobox-leucine zipper protein ATHB-6 isoform X1
TrEMBL	A0A444ZTV8	0.0	A0A444ZTV8_ARAHY; Uncharacterized protein
STRING	XP_004504111.1	1e-133	(Cicer arietinum)
STRING	GLYMA05G30940.1	1e-133	(Glycine max)