PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy019145

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

MYB_related

Protein Properties

Length: 155aa MW: 17702.2 Da PI: 10.3963

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59547636	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.1	2.7e-10	46	82	3	41
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41 W ++E e++++a +++G++ Wk++a+ + +R+ +++ Ahy019145 46 QWNKDELERFYEAYRKYGKD-WKKVAAAVR-NRSVEMVE 82 6***************99.*****.*99875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	1.64E-11	42	91	IPR009057	Homeodomain-like
PROSITE profile	PS51293	10.993	42	95	IPR017884	SANT domain
SMART	SM00717	4.7E-5	43	91	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	7.6E-6	45	85	IPR009057	Homeodomain-like
Pfam	PF00249	5.3E-9	46	86	IPR001005	SANT/Myb domain
CDD	cd00167	1.09E-6	47	81	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence Send to blast
MAPTRKPRSM NKRFSSLNEV SPEKEGMNSN KNKQKKKKLS DKLGSQWNKD ELERFYEAYR 60 KYGKDWKKVA AAVRNRSVEM VEALYNMNRA YLSLPEGTAS VVGLIAMMTD HYNVLEESDS 120 EKESIDSPGS RKPVKRKRGK IELGASKDSV HTQSI

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015968591.1	1e-101	protein ALWAYS EARLY 2 isoform X1
Refseq	XP_015968592.1	1e-101	protein ALWAYS EARLY 2 isoform X1
Refseq	XP_015968593.1	1e-101	protein ALWAYS EARLY 1 isoform X2
Refseq	XP_015968594.1	1e-101	protein ALWAYS EARLY 2 isoform X3
Refseq	XP_015968595.1	1e-101	protein ALWAYS EARLY 3 isoform X4
Refseq	XP_025603663.1	1e-101	protein ALWAYS EARLY 2 isoform X1
Refseq	XP_025603664.1	1e-101	protein ALWAYS EARLY 2 isoform X1
Refseq	XP_025603665.1	1e-101	protein ALWAYS EARLY 1 isoform X2
Refseq	XP_025603666.1	1e-101	protein ALWAYS EARLY 2 isoform X3
Refseq	XP_025603667.1	1e-101	protein ALWAYS EARLY 3 isoform X4
Swissprot	Q6A331	3e-53	ALY1_ARATH; Protein ALWAYS EARLY 1
TrEMBL	A0A445CNH1	1e-100	A0A445CNH1_ARAHY; Uncharacterized protein
STRING	AES61372	3e-81	(Medicago truncatula)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	1e-34	DNA binding

Publications ? help Back to Top
Pfaff C, et al. ALY RNA-Binding Proteins Are Required for Nucleocytosolic mRNA Transport and Modulate Plant Growth and Development. Plant Physiol., 2018. 177(1): p. 226-240 [PMID:29540591]