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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Ahy019558 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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| Family | bZIP | ||||||||
| Protein Properties | Length: 505aa MW: 55350.2 Da PI: 7.7318 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 51.7 | 1.9e-16 | 296 | 350 | 3 | 57 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57
++kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L +eN++L k+l + ++
Ahy019558 296 DVKRVRRMLSNRESARRSRRRKQAHLNELETQVSQLRGENSTLLKRLTDVSHKYN 350
689*****************************************99988777665 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SMART | SM00338 | 2.6E-20 | 294 | 358 | IPR004827 | Basic-leucine zipper domain |
| PROSITE profile | PS50217 | 11.461 | 296 | 351 | IPR004827 | Basic-leucine zipper domain |
| Pfam | PF00170 | 2.6E-14 | 297 | 349 | IPR004827 | Basic-leucine zipper domain |
| SuperFamily | SSF57959 | 7.88E-12 | 298 | 348 | No hit | No description |
| Gene3D | G3DSA:1.20.5.170 | 8.9E-13 | 298 | 349 | No hit | No description |
| CDD | cd14702 | 3.73E-7 | 299 | 350 | No hit | No description |
| PROSITE pattern | PS00036 | 0 | 301 | 316 | IPR004827 | Basic-leucine zipper domain |
| Pfam | PF12498 | 3.4E-42 | 365 | 493 | IPR020983 | Basic leucine-zipper, C-terminal |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 505 aa Download sequence Send to blast |
XSYMTDIPLW DLSLSPSQKQ KRKHQRTILA HRNQSQNLKG QRQNIVITNS IWISMDRVFS 60 VDEIPDHFWS SIPYDTNHHH PPPSNSNSHI NRSPSEWAFQ RFLQEAAPPS PPHRNDAVFF 120 IHDDDHTHPH VTKPDPNDTL PVPKNDAVLT NASPPPPPPP PRTKTGASSS LGVDSDDYQA 180 LLKNKLNLAC AAVAMTRAAS LSKSQDPATF ADSGSSNISQ VGPQPSIKGS GTSGNDPPKI 240 QDKDAKAPIG IPSIPVIQKK PAVTARPSTS GSSREQSDDE EAEGETDLND NMDPADVKRV 300 RRMLSNRESA RRSRRRKQAH LNELETQVSQ LRGENSTLLK RLTDVSHKYN ESAVDNRVLK 360 ADVETLRAKV KMAEETVKRI TGLNPVMHAM SDLTSMGIPT FDGSPPDTSA DASVPVRDDT 420 HHHHHFFQQT SGNHHVASHD LRVNNGLGDI SVIENVPQNA AAAVVVGNKM GQTAPVQRVA 480 SLEHLQKRIR GGVDSCGGPS NNHEH |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 310 | 317 | RRSRRRKQ |
| 2 | 312 | 317 | SRRRKQ |
| Functional Description ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Description | |||||
| UniProt | Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. | |||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_015940076.1 | 0.0 | light-inducible protein CPRF2 isoform X1 | ||||
| Refseq | XP_025619256.1 | 0.0 | light-inducible protein CPRF2 isoform X1 | ||||
| Swissprot | Q99090 | 1e-115 | CPRF2_PETCR; Light-inducible protein CPRF2 | ||||
| TrEMBL | A0A445BJZ9 | 0.0 | A0A445BJZ9_ARAHY; Uncharacterized protein | ||||
| STRING | XP_004495799.1 | 1e-167 | (Cicer arietinum) | ||||
| Publications ? help Back to Top | |||
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