PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy019634

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

BBR-BPC

Protein Properties

Length: 275aa MW: 30957.4 Da PI: 9.8468

Description

BBR-BPC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59552468	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GAGA_bind	310	8.1e-95	1	275	1	301
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkllalllv 87 mddd + n+gyyep +lglqlm +++rd+k+ r+ + l ++++a+++rd +++ rd+++++ ++++++++++ Ahy019634 1 MDDDMLNMTNWGYYEPF--KGGHLGLQLMPGMTDRDTKPfmpgRDPTM-LVNTNGAFHPRDcvvseaqmpINY-VRDSWISQ--------RDRFFNMQPT 88 899977779****98..4579**************9888888.9*******777777766666.67777777........789**6 PP GAGA_bind 88 enslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaders 187 + + + vl++t+ + + q+++++ r+e+ +++ + ++e + +k++ r +++pk+kk +k+k+ +++++ + + Ahy019634 89 NPN--------YPVLPETSAAPT-------QITQPPDTSRDEKADIVEE--TVQKEGVQPRKRQGRVASTTPKAKKPRKPKD-------NSNAPV--Q-R 161 554........889999999883.......3344444433333222222..2233444555555566777888888888887.......344455..2.3 PP GAGA_bind 188 kaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkd 287 ++ k+i++v+ng+++D+s+lP+PvCsCtG+++qCY+WG+GGWqSaCCtt++S+yPLP+s krrgaRiagrKmSqgafkk+LekLaaeGy+++np+DL++ Ahy019634 162 SKPMKTIEFVINGIDMDISSLPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSTYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFGNPIDLRN 261 45789******************************************************************************************* PP GAGA_bind 288 hWAkHGtnkfvtir 301 hWA+HGtnkfvtir Ahy019634 262 HWARHGTNKFVTIR 275 ***********8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF06217	8.4E-104	1	275	IPR010409	GAGA-binding transcriptional activator
SMART	SM01226	8.8E-155	1	275	IPR010409	GAGA-binding transcriptional activator

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence Send to blast
MDDDMLNMTN WGYYEPFKGG HLGLQLMPGM TDRDTKPFMP GRDPTMLVNT NGAFHPRDCV 60 VSEAQMPINY VRDSWISQRD RFFNMQPTNP NYPVLPETSA APTQITQPPD TSRDEKADIV 120 EETVQKEGVQ PRKRQGRVAS TTPKAKKPRK PKDNSNAPVQ RSKPMKTIEF VINGIDMDIS 180 SLPIPVCSCT GTPQQCYRWG CGGWQSACCT TNVSTYPLPM SMKRRGARIA GRKMSQGAFK 240 KVLEKLAAEG YNFGNPIDLR NHWARHGTNK FVTIR

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. Negatively regulates the homeotic gene AGL11/STK, which controls ovule primordium identity, by a cooperative binding to purine-rich elements present in the regulatory sequence leading to DNA conformational changes. {ECO:0000269\|PubMed:14731261, ECO:0000269\|PubMed:15722463}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015957924.1	0.0	protein BASIC PENTACYSTEINE2
Refseq	XP_025691525.1	0.0	protein BASIC PENTACYSTEINE2
Swissprot	Q9SKD0	1e-100	BPC1_ARATH; Protein BASIC PENTACYSTEINE1
TrEMBL	A0A444ZSL5	0.0	A0A444ZSL5_ARAHY; Uncharacterized protein
STRING	XP_007158817.1	1e-168	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14685.3	3e-99	basic pentacysteine 2