PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy019716
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 128aa    MW: 13981.6 Da    PI: 4.0676
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59542090PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.53.5e-091155345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                      W+ e d+ + +a   ++ +   +W++Ia+ +  g+tl+++k ++ 
        Ahy019716 11 EWSFEQDKAFENALGTYPEDdldRWEKIAADVT-GKTLEEVKQHYE 55
                     7*******************************9.**********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007171.2E-7860IPR001005SANT/Myb domain
SuperFamilySSF466892.77E-111066IPR009057Homeodomain-like
PROSITE profilePS500906.261058IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.605.2E-41158IPR009057Homeodomain-like
CDDcd001672.82E-71158No hitNo description
PfamPF002491.2E-61155IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    Send to blast
MAGDEVGSSS EWSFEQDKAF ENALGTYPED DLDRWEKIAA DVTGKTLEEV KQHYELLVDD  60
VNLIESGRVT LPAYNSTSEG STGNASDEGA GKKGGQPWNS NSESNNGSKA SRSDQERRKG  120
IAWTEDEX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A7e-21777676RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that coordinates abscisic acid (ABA) biosynthesis and signaling-related genes via binding to the specific promoter motif 5'-(A/T)AACCAT-3'. Represses ABA-mediated salt (e.g. NaCl and KCl) stress tolerance. Regulates leaf shape and promotes vegetative growth. {ECO:0000269|PubMed:26243618}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salicylic acid (SA) and gibberellic acid (GA) (PubMed:16463103). Triggered by dehydration and salt stress (PubMed:26243618). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:26243618}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016190388.17e-87transcription factor SRM1
RefseqXP_016190389.17e-87transcription factor SRM1
RefseqXP_020975320.17e-87transcription factor SRM1
RefseqXP_020975321.17e-87transcription factor SRM1
RefseqXP_025638868.17e-87transcription factor SRM1
RefseqXP_025638869.17e-87transcription factor SRM1
RefseqXP_029147598.17e-87transcription factor SRM1
RefseqXP_029147599.17e-87transcription factor SRM1
RefseqXP_029147600.17e-87transcription factor SRM1
RefseqXP_029147601.17e-87transcription factor SRM1
SwissprotQ9FNN63e-38SRM1_ARATH; Transcription factor SRM1
TrEMBLA0A445DPG02e-85A0A445DPG0_ARAHY; Uncharacterized protein
STRINGGLYMA08G40020.52e-65(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-40MYB family protein
Publications ? help Back to Top
  1. Wang T, et al.
    Salt-Related MYB1 Coordinates Abscisic Acid Biosynthesis and Signaling during Salt Stress in Arabidopsis.
    Plant Physiol., 2015. 169(2): p. 1027-41
    [PMID:26243618]
  2. Chen YS, et al.
    Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis.
    Plant Mol. Biol., 2017. 93(3): p. 299-311
    [PMID:27866313]