PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy019998
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HD-ZIP
Protein Properties Length: 359aa    MW: 40276.3 Da    PI: 4.9151
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59524612PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.26.7e-1963116356
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
   Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                k+++++ eq+++Le+ Fe ++++  e++ +LA++lgL+ rqV vWFqNrRa++k
  Ahy019998  63 KKRRLSVEQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 116
                56689************************************************9 PP
2HD-ZIP_I/II132.41.7e-4262154193
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  ekkrrls eqvk+LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy +Lk++ydalk ++++L++++++L++++ke
    Ahy019998  62 EKKRRLSVEQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKNNYDALKVNHDALKQDNDALHKQIKE 154
                  69****************************************************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.17E-1953120IPR009057Homeodomain-like
PROSITE profilePS5007117.7558118IPR001356Homeobox domain
SMARTSM003896.1E-1861122IPR001356Homeobox domain
PfamPF000464.4E-1663116IPR001356Homeobox domain
CDDcd000862.46E-1763119No hitNo description
Gene3DG3DSA:1.10.10.606.1E-2065125IPR009057Homeodomain-like
PRINTSPR000311.1E-58998IPR000047Helix-turn-helix motif
PROSITE patternPS00027093116IPR017970Homeobox, conserved site
PRINTSPR000311.1E-598114IPR000047Helix-turn-helix motif
PfamPF021834.9E-17118160IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MKRTGSSSDS LGALMTICPS STEEQSPRSN HVYGHDPLFQ SMVLDGLDEE GCTVEESGHH  60
SEKKRRLSVE QVKALEKNFE VENKLEPERK VKLAQELGLQ PRQVAVWFQN RRARWKTKQL  120
ERDYGVLKNN YDALKVNHDA LKQDNDALHK QIKELKTRLQ EENTASDVSV KEEQITMPES  180
EEKLLVMNEE HNTTTPDETS ILGSGSNVND HHLYHDNCFN DNSDHAVVAL GATTTSPSPS  240
PSSPPLFPSD FNKDGSSDSD SSAILNEDTK DAISSSGVLQ SNHHFLMFSE SPALKFNCSM  300
LASSSSMNCF QFQKPHQTTQ YVKMEEQHNF IGAADEACNL IFSDEQAPTL HWYSSDQWG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1110118RRARWKTKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016180931.10.0homeobox-leucine zipper protein ATHB-6 isoform X1
RefseqXP_025681444.10.0homeobox-leucine zipper protein ATHB-6
TrEMBLA0A444X0M50.0A0A444X0M5_ARAHY; Uncharacterized protein
STRINGPOPTR_0005s07290.11e-121(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G40060.12e-69homeobox protein 16