PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy020015
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C3H
Protein Properties Length: 289aa    MW: 31005.9 Da    PI: 4.296
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58463551PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH36.11.1e-11194215526
                --SGGGGTS--TTTTT-SS-SS CS
    zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                 C f+++tG Ck+G +CkF+H+
  Ahy020015 194 DCAFYMKTGNCKFGINCKFNHP 215
                7********************8 PP
2zf-CCCH39.78.3e-13265288326
                S---SGGGGTS--TTTTT-SS-SS CS
    zf-CCCH   3 telCrffartGtCkyGdrCkFaHg 26 
                 ++C++++rtG C++G++CkF+H+
  Ahy020015 265 KRECPYYMRTGSCRFGANCKFNHP 288
                689********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF902291.83E-6187219IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010314.652189217IPR000571Zinc finger, CCCH-type
SMARTSM003563.1E-5189216IPR000571Zinc finger, CCCH-type
PfamPF006422.8E-9194215IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.106.1E-5195215IPR000571Zinc finger, CCCH-type
SMARTSM003568.5218242IPR000571Zinc finger, CCCH-type
PROSITE profilePS501036.972226243IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010314.108262289IPR000571Zinc finger, CCCH-type
SMARTSM003561.3E-5262289IPR000571Zinc finger, CCCH-type
SuperFamilySSF902294.45E-6263288IPR000571Zinc finger, CCCH-type
PfamPF006421.5E-10265288IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.103.7E-5268287IPR000571Zinc finger, CCCH-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
GFGNVEGRME HTESDSASSS LPNGGGDCIT ATQQDPQLAP SSNHGTDDPQ PSDLYQTAQD  60
GSLSAELQSK LDLKGLEGVG EEGGEIGDKV SNFGQVGGGV DDGGVTNGDD EVVNGGDEGF  120
KGGGADGDNW GWETNSWEEE NVNVGLVDGD YDGLVNEYVD ADGGDDVDGD EKREEKSGGG  180
RAQHQYPWRP DAQDCAFYMK TGNCKFGINC KFNHPINRRK TSIIXRSGGC KFGKDCKYNH  240
TKGKDLTTEE VAELNFLGLP IRLGKRECPY YMRTGSCRFG ANCKFNHPX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025703330.11e-154zinc finger CCCH domain-containing protein 43
TrEMBLA0A445EQT61e-153A0A445EQT6_ARAHY; Uncharacterized protein
STRINGGLYMA17G13580.11e-64(Glycine max)