PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy020025
Common NameSPL2
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family SBP
Protein Properties Length: 224aa    MW: 24380.9 Da    PI: 7.1253
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S54175392PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP82.55.8e-26172224153
                --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETT CS
        SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhels 53 
                +CqvegC  dl +ak+yhr+h+vCe hsk+p+v+++gle+rfCqqCsrfh ls
  Ahy020025 172 CCQVEGCGLDLLSAKDYHRKHRVCENHSKSPKVVIAGLERRFCQQCSRFHGLS 224
                6*************************************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.1100.104.0E-27165224IPR004333Transcription factor, SBP-box
PROSITE profilePS5114122.324170224IPR004333Transcription factor, SBP-box
SuperFamilySSF1036123.01E-24171223IPR004333Transcription factor, SBP-box
PfamPF031101.7E-20173224IPR004333Transcription factor, SBP-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MEWNAKSPSQ WEWEHLFFSN AKVTENPKLQ PPPDWSGEAN GETNVGLLDN SGGSGCSESE  60
LMNPSSSRSS KSASINSSSN RDSKTSIFTL ESSQDDSSGK KEELVENSHS HEAPPGSGEP  120
LLTLKLGKRL YFEDVCPGSD AKKNQSSSGA PIQAVSSGKK SKSNAQNMQY PCCQVEGCGL  180
DLLSAKDYHR KHRVCENHSK SPKVVIAGLE RRFCQQCSRF HGLS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj0_A5e-19172223556squamosa promoter-binding protein-like 12
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025691683.11e-163squamosa promoter-binding-like protein 12 isoform X2
RefseqXP_025691686.11e-163squamosa promoter-binding-like protein 10 isoform X4
RefseqXP_025691687.11e-163squamosa promoter-binding-like protein 12 isoform X5
RefseqXP_025691688.11e-163squamosa promoter-binding-like protein 12 isoform X5
RefseqXP_025691689.11e-163squamosa promoter-binding-like protein 12 isoform X5
RefseqXP_025691690.11e-164squamosa promoter-binding-like protein 12 isoform X6
TrEMBLA0A0K0KCL41e-160A0A0K0KCL4_ARAHY; Squamosa promoter-binding-like protein
TrEMBLA0A445DL891e-160A0A445DL89_ARAHY; Uncharacterized protein
STRINGXP_007163771.16e-91(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43270.31e-42squamosa promoter binding protein-like 2