PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy020043
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bZIP
Protein Properties Length: 267aa    MW: 29601.4 Da    PI: 7.8824
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59526234PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.81.5e-15117167454
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                 kr rrk +NRe+ArrsR+RK+a++  Le  v++L  eN +L k+l   ++
  Ahy020043 117 MKRLRRKVSNRESARRSRRRKQAYLTDLESQVEQLRLENATLYKQLTDASQ 167
                79*****************************************87766555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.5E-14114178IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.335116179IPR004827Basic-leucine zipper domain
PfamPF001703.2E-13117164IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.04E-12118167No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-12118155No hitNo description
PROSITE patternPS000360121136IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.103.9E-5156188No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
XSASAAFRNP DVVVTTFSTC TSGVTDNNNN INYNNSTQQQ QQLVCSQNLT RNHSTIDSQS  60
SICGTATVGS PVSANKPNGG RGSEGKGGTT CGSSSREASD EDDEAGPCEE STNPIDMKRL  120
RRKVSNRESA RRSRRRKQAY LTDLESQVEQ LRLENATLYK QLTDASQHFR DADTNNRVLK  180
SDVEALRAKV KLAEDMVARS SFTNLNNQLI QNQRGQMNTN NNLRRVAHVS FRQPLLSMEM  240
TPHMEAASLV LMDKTQPILE DLPETWT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120136RRKVSNRESARRSRRRK
2130137RRSRRRKQ
3132137SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters. {ECO:0000269|PubMed:11133985}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025659570.11e-164basic leucine zipper 9 isoform X1
SwissprotQ6H5008e-54RSBZ4_ORYSJ; bZIP transcription factor RISBZ4
TrEMBLA0A445CVX71e-162A0A445CVX7_ARAHY; Uncharacterized protein
STRINGGLYMA06G08390.19e-81(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.12e-37basic leucine zipper 9
Publications ? help Back to Top
  1. Onodera Y,Suzuki A,Wu CY,Washida H,Takaiwa F
    A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif.
    J. Biol. Chem., 2001. 276(17): p. 14139-52
    [PMID:11133985]
  2. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]