PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy020065

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

HSF

Protein Properties

Length: 394aa MW: 44424.3 Da PI: 6.3986

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59524590	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.4	6.5e-35	20	111	2	101
HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXX CS HSF_DNA-bind 2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelleki 97 Fl k+y++++d+++++++sw+ +++nsfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F k++k+ll++i Ahy020065 20 FLLKTYDMVDDSATDDIVSWNsSTNNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFHKIHPER---------WEFANDDFIKDQKHLLKNI 107 9******************8889*************************************999.........*************** PP XXXX CS HSF_DNA-bind 98 krkk 101 +r+k Ahy020065 108 HRRK 111 98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.10	2.5E-36	16	110	IPR011991	Winged helix-turn-helix DNA-binding domain
SMART	SM00415	2.4E-58	16	110	IPR000232	Heat shock factor (HSF)-type, DNA-binding
SuperFamily	SSF46785	1.36E-34	16	110	IPR011991	Winged helix-turn-helix DNA-binding domain
PRINTS	PR00056	2.1E-18	20	43	IPR000232	Heat shock factor (HSF)-type, DNA-binding
Pfam	PF00447	7.8E-30	20	110	IPR000232	Heat shock factor (HSF)-type, DNA-binding
PRINTS	PR00056	2.1E-18	59	71	IPR000232	Heat shock factor (HSF)-type, DNA-binding
PROSITE pattern	PS00434	0	60	84	IPR000232	Heat shock factor (HSF)-type, DNA-binding
PRINTS	PR00056	2.1E-18	72	84	IPR000232	Heat shock factor (HSF)-type, DNA-binding

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence Send to blast
MEGGAPQSTG GGAGGGPAPF LLKTYDMVDD SATDDIVSWN SSTNNSFVVW NPPEFARLLL 60 PTYFKHNNFS SFIRQLNTYG FHKIHPERWE FANDDFIKDQ KHLLKNIHRR KPIHSHSHPP 120 GSVVDPERAA FEEEIEKLNR EKSSIESNIF SFKQHQSTAK LHLEEFQQRL DGMEKRQKHL 180 LNIFEKALQN PTFVEQFSRK IESMDLSAYN KKRRLPQVDD MQPVVESSFV DNPNNFRMEF 240 GNVFHQDFSN KLRLELSPAV SDMNLVSRST QSSNEDGESP QKKISEGEQT GIQTRTSVPF 300 APGNIGAADT GASFTFKMDS CLSQRATNSE SPKLCTLEPS SEEGDSHISC QLTLASCPFK 360 VNRNSYSAKA SQIDSQEIGK LAEPRFHSNS KESD

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence Send to blast

MEGGAPQSTG GGAGGGPAPF LLKTYDMVDD SATDDIVSWN SSTNNSFVVW NPPEFARLLL  60
PTYFKHNNFS SFIRQLNTYG FHKIHPERWE FANDDFIKDQ KHLLKNIHRR KPIHSHSHPP  120
GSVVDPERAA FEEEIEKLNR EKSSIESNIF SFKQHQSTAK LHLEEFQQRL DGMEKRQKHL  180
LNIFEKALQN PTFVEQFSRK IESMDLSAYN KKRRLPQVDD MQPVVESSFV DNPNNFRMEF  240
GNVFHQDFSN KLRLELSPAV SDMNLVSRST QSSNEDGESP QKKISEGEQT GIQTRTSVPF  300
APGNIGAADT GASFTFKMDS CLSQRATNSE SPKLCTLEPS SEEGDSHISC QLTLASCPFK  360
VNRNSYSAKA SQIDSQEIGK LAEPRFHSNS KESD

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5d5u_B	5e-20	1	110	8	129	Heat shock factor protein 1
5d5v_B	5e-20	1	110	8	129	Heat shock factor protein 1
5d5v_D	5e-20	1	110	8	129	Heat shock factor protein 1
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016175574.1	0.0	heat stress transcription factor A-5
Refseq	XP_025674759.1	0.0	heat stress transcription factor A-5
Swissprot	Q94BZ5	1e-134	HSFA5_ARATH; Heat stress transcription factor A-5
TrEMBL	A0A445AB17	0.0	A0A445AB17_ARAHY; Uncharacterized protein
STRING	GLYMA05G28460.1	0.0	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-136	HSF family protein

Publications ? help Back to Top
Reňák D,Gibalová A,Solcová K,Honys D A new link between stress response and nucleolar function during pollen development in Arabidopsis mediated by AtREN1 protein. Plant Cell Environ., 2014. 37(3): p. 670-83 [PMID:23961845]