PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy020169

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Dof

Protein Properties

Length: 250aa MW: 25558.3 Da PI: 8.6956

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S58295814	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.9	1.1e-38	26	86	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++l+cprCdstntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++PvGgg+rkn k+s Ahy020169 26 EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRS 86 57899****************************************************9876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-28	4	84	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.3E-33	28	84	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.264	30	84	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	32	68	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence Send to blast
MPSSDSGESR RSAKPHNTSL APPPAEQEHL PCPRCDSTNT KFCYYNNYNF SQPRHFCKSC 60 RRYWTHGGTL RDIPVGGGSR KNAKRSRTVP SASTATTSSS AGPAVTSVSS VTPPPWFPWP 120 GNNHPGAPVQ FGGVVVDGEA KGNNVSLCGG SFTSLLSNTQ QGPGGFLALG GFGLGLGPGL 180 ENVGFGMGMG RGGWAFPGVV ADGGSIGGGV AGSGVGHTWQ FEGGDQGGFV SGDCFPWPGL 240 AISTPGNGLK

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. Enhances the DNA binding of OBF transcription factors to OCS elements.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By auxin and salicylic acid (SA). {ECO:0000269\|PubMed:10758484}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025698743.1	1e-130	dof zinc finger protein DOF3.4
Swissprot	Q39088	3e-60	DOF34_ARATH; Dof zinc finger protein DOF3.4
TrEMBL	A0A444WSW6	1e-129	A0A444WSW6_ARAHY; Uncharacterized protein
STRING	GLYMA02G06970.2	2e-87	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50410.1	2e-52	OBF binding protein 1

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546]