PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy020297

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

MYB_related

Protein Properties

Length: 432aa MW: 48788.1 Da PI: 8.9034

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59558814	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50	6.9e-16	29	73	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT +E++++++a k++G W++I +++g ++t+ q++s+ qk+ Ahy020297 29 RERWTDDEHKKFLEALKLYGRA-WRRIEEHVG-TKTAVQIRSHAQKF 73 78****************88.*****.**********98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	3.29E-16	23	76	IPR009057	Homeodomain-like
PROSITE profile	PS51294	19.932	24	78	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.6E-8	26	75	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	7.0E-17	27	76	IPR006447	Myb domain, plants
SMART	SM00717	1.4E-12	28	76	IPR001005	SANT/Myb domain
Pfam	PF00249	3.3E-13	29	72	IPR001005	SANT/Myb domain
CDD	cd00167	3.17E-9	31	74	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence Send to blast
XHVQLNDQFS CGNDYSPKVR KPYTITKQRE RWTDDEHKKF LEALKLYGRA WRRIEEHVGT 60 KTAVQIRSHA QKFFSKVYSS IQFHYPLSAI XFLYAIRAND RCTHFALYNX KVVRDSSGNP 120 TSLVEPIEIP PPRPKRKPMH PYPRKLVEIP KREISNLEHS VRSNSPKSAD VDQENKSPKS 180 VLSAVVSDTL GSSDSDTLAG SLSPVSSMSG GNTSNSALAE PKSSFEEDRS TPLVGLNANS 240 AQHEHPLVKL ELSHNESVST KDDVAEESSS RTLKLFGTTL LLTDTCTPIN EVSKPVPINT 300 MHLLQLQSRN SDATKDPATV VAPWWILSHN RPFIPLHKQP EEKNLDSDLG EFETKEVQKE 360 PSWSGSNTSS VSDEENTAKS KEQGMSCIRV RPRTFGKGFV PYKRCMAERE KNHYYSTITC 420 EKREEQRIKL SL

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence Send to blast

XHVQLNDQFS CGNDYSPKVR KPYTITKQRE RWTDDEHKKF LEALKLYGRA WRRIEEHVGT  60
KTAVQIRSHA QKFFSKVYSS IQFHYPLSAI XFLYAIRAND RCTHFALYNX KVVRDSSGNP  120
TSLVEPIEIP PPRPKRKPMH PYPRKLVEIP KREISNLEHS VRSNSPKSAD VDQENKSPKS  180
VLSAVVSDTL GSSDSDTLAG SLSPVSSMSG GNTSNSALAE PKSSFEEDRS TPLVGLNANS  240
AQHEHPLVKL ELSHNESVST KDDVAEESSS RTLKLFGTTL LLTDTCTPIN EVSKPVPINT  300
MHLLQLQSRN SDATKDPATV VAPWWILSHN RPFIPLHKQP EEKNLDSDLG EFETKEVQKE  360
PSWSGSNTSS VSDEENTAKS KEQGMSCIRV RPRTFGKGFV PYKRCMAERE KNHYYSTITC  420
EKREEQRIKL SL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016166827.1	0.0	protein REVEILLE 1
Refseq	XP_025667004.1	0.0	protein REVEILLE 1
TrEMBL	V5T8I4	0.0	V5T8I4_ARAHY; Putative MYB-related protein 13
STRING	GLYMA14G39130.1	1e-164	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	4e-45	MYB_related family protein