PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy020532
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family G2-like
Protein Properties Length: 273aa    MW: 29235.3 Da    PI: 7.2947
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59526333PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.91.4e-30111164155
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  Ahy020532 111 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 164
                59*******************.********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.059108167IPR017930Myb domain
SuperFamilySSF466892.42E-20108168IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.8E-31110169IPR009057Homeodomain-like
TIGRFAMsTIGR015572.7E-24112164IPR006447Myb domain, plants
PfamPF002499.8E-8114163IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MREEDSNWFA RWEDELPPPE ELMPLSQTLI TPDLAIAFDI PSPHTPTAAA TATPTTPNHH  60
LHHHQQPQQP QPPSNPSPSH QQQPSSGGDF ADSGDLGSGA AGEEPARTLK RPRLVWTPQL  120
HKRFVDAVAH LGIKNAVPKT IMQLMSVDGL TRENVASHLQ KYRLYLKRMQ GLSAAGPGGG  180
GAGGGGSDAA TDHLFASSPV PAHFLHPAAA AAGGRPNSEH FLPFVSVPAM HHQQHHHQMA  240
AXPAGAAAMQ HVQLQQQFHR QASGHFGSPP NGR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5lxu_A5e-32111167157Transcription factor LUX
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that acts as a negative regulator of freezing tolerance via a CBF-independent pathway. {ECO:0000269|PubMed:20331973}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought, salt and abscisic acid (ABA). Down-regulated by cold. {ECO:0000269|PubMed:20331973}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016181526.10.0transcription factor MYBC1
RefseqXP_025681635.10.0transcription factor MYBC1
SwissprotO222102e-67MYBC1_ARATH; Transcription factor MYBC1
TrEMBLA0A445B2I90.0A0A445B2I9_ARAHY; Uncharacterized protein
STRINGXP_007162050.11e-103(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10760.12e-51G2-like family protein
Publications ? help Back to Top
  1. Sardesai N,Laluk K,Mengiste T,Gelvin S
    The Arabidopsis Myb transcription factor MTF1 is a unidirectional regulator of susceptibility to Agrobacterium.
    Plant Signal Behav, 2018.
    [PMID:24785741]