PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy020771

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

MYB_related

Protein Properties

Length: 207aa MW: 23039.1 Da PI: 10.6865

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S54162554	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.8	2.9e-09	55	90	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE e +++a +++G++ Wk+++ + +R+ +++ Ahy020771 55 QWSKEELEHFYEAYRKYGKD-WKKVSLAVR-NRSVEMV 90 6***************99.*****.98876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51293	9.07	51	104	IPR017884	SANT domain
SuperFamily	SSF46689	1.35E-10	52	100	IPR009057	Homeodomain-like
SMART	SM00717	0.0018	52	100	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	2.7E-5	55	90	IPR009057	Homeodomain-like
Pfam	PF00249	4.0E-8	55	90	IPR001005	SANT/Myb domain
CDD	cd00167	3.83E-6	56	90	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence Send to blast
MAPSKKSRSV NKRFPNVREA ALSKDKNAEN ASKNKQKASP GTQKKRKLAD MLGPQWSKEE 60 LEHFYEAYRK YGKDWKKVSL AVRNRSVEMV EALYTMNRAY LSLPEGTASV VGLIAMMTDR 120 YSVLGGSDSG KESNEDAEVS KGSQKRLRRK QMNDHKTLEG PFSDHSQSQS VASGDGCLSL 180 LKTRNSGLTP HAVRKRTPRV PISHSIG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020981893.1	1e-137	LOW QUALITY PROTEIN: protein ALWAYS EARLY 3-like
Refseq	XP_025611507.1	1e-138	protein ALWAYS EARLY 3 isoform X3
Swissprot	Q6A332	2e-56	ALY3_ARATH; Protein ALWAYS EARLY 3
TrEMBL	A0A445ELV8	1e-136	A0A445ELV8_ARAHY; Uncharacterized protein
STRING	GLYMA07G37961.2	1e-116	(Glycine max)
STRING	XP_007154247.1	1e-118	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	7e-59	DNA binding

Publications ? help Back to Top
Pfaff C, et al. ALY RNA-Binding Proteins Are Required for Nucleocytosolic mRNA Transport and Modulate Plant Growth and Development. Plant Physiol., 2018. 177(1): p. 226-240 [PMID:29540591]