PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy020848
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 154aa    MW: 16907.2 Da    PI: 4.8467
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59526434PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.66e-10246554
               HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
        HLH  5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
               h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  Ahy020848  2 HSIAERLRRERIAERMKALQELVPSiN------KTDRAAMLDEIVDYVKFL 46
               99***********************77......****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.44146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-7246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.9E-15255IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.60E-10251No hitNo description
SuperFamilySSF474599.42E-15256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.9E-11352IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
XHSIAERLRR ERIAERMKAL QELVPSINKT DRAAMLDEIV DYVKFLRLQV KVLSMSRLGG  60
AGAVAQLVAD VPLSAVEGEE IEGGGNNEQA WEKWSNDGIE QQVAKLMEED VGAAMQFLQS  120
KALCIMPISL ASAIFRMPPS DPSSLIKPES NSHS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1611RLRRER
Functional Description ? help Back to Top
Source Description
UniProtRequired for ovule fertilization. {ECO:0000269|PubMed:15634699}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016176130.11e-106transcription factor UNE12 isoform X2
RefseqXP_025676189.11e-106transcription factor UNE12 isoform X2
SwissprotO227682e-69UNE12_ARATH; Transcription factor UNE12
TrEMBLA0A444XNE01e-104A0A444XNE0_ARAHY; Uncharacterized protein
STRINGXP_007144828.14e-93(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.34e-55bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]