PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy021221
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ARR-B
Protein Properties Length: 631aa    MW: 69389.8 Da    PI: 5.8618
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59539889PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like894.3e-28164217155
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                kpr++W+ eLH++F+ av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl
  Ahy021221 164 KPRVVWSVELHQQFMAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 217
                79*******************.********************************8 PP
2Response_reg53.61.3e-1898923103
                   CEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS-- CS
  Response_reg  23 yeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfd 103
                   y ev+ ++ +e+alell+ ++  +D+++ D+ mp+mdG++ll++i  e  +lp+i+++a + +  + + +  Ga d+l Kp +
     Ahy021221   9 Y-EVTKCKCAEAALELLRGNKngFDIVISDVHMPDMDGFKLLEHIGLEM-DLPVIMMSADDGKHVVMKGVTHGACDYLIKPXA 89 
                   6.99*************777778**********************6654.8******************************64 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011029.1661101IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.45E-19187No hitNo description
PIRSFPIRSF0363924.5E-1321623IPR017053Response regulator B-type, plant
SMARTSM004481.7E-91100IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521721.39E-21287IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23005.1E-25291No hitNo description
PfamPF000722.3E-15489IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF466894.66E-20161221IPR009057Homeodomain-like
PROSITE profilePS5129410.888161220IPR017930Myb domain
Gene3DG3DSA:1.10.10.608.9E-30163222IPR009057Homeodomain-like
TIGRFAMsTIGR015571.9E-24164217IPR006447Myb domain, plants
PfamPF002492.2E-7166216IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 631 aa     Download sequence    Send to blast
EKMLKACLYE VTKCKCAEAA LELLRGNKNG FDIVISDVHM PDMDGFKLLE HIGLEMDLPV  60
IMMSADDGKH VVMKGVTHGA CDYLIKPXAN RGSEEYMAAC GSEEKDWLER SRAIGKHIDE  120
GDRQQKVSDD ADYSSSANEG KSSKKRRDEE EDADERDDSS TLKKPRVVWS VELHQQFMAA  180
VNQLGIDKAV PKKILELMNV PGLTRENVAS HLQKYRLYLR RLSGVSQQQN NLNNSFMNPQ  240
DPTFGSTSIN GIDLQALSVA GQLPAQSLAK LQAAGLGRST AKPVMSMPLV EQRNLFSFES  300
PKLRFGEGQM QHLNTNKPIN LLHGIPTNME PKQLANLHQS AQSLGNLNMR INASVAQRSP  360
LLMQMGQSQP RGQMIGENGS HVNQLPTSLL QPTVPNRISN GVIRNGIASS SNINAAYNQV  420
PQSSSFLNFP MNQTNEMSVR SFPLGSHPGI SNITTKGMLQ EEVTSGIKGS SGFVPNYDMF  480
NELQPQKSHK DWDLTPAGLT YDATQHSNHV QGNTDVSVSP SVLVHPGFTS IQQTGQNRDT  540
TSSMGKDMFS IGEGMDQGNL QNISQPQNPL LVDNSVRVKA ERVPDASSQT NFFPEQYGQE  600
DLMSALLKQE GIGLAENEFD FDGYSLDNIP V
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A2e-22163223464ARR10-B
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins. Involved in the expression of nuclear genes for components of mitochondrial complex I. Promotes cytokinin-mediated leaf longevity. Involved in the ethylene signaling pathway in an ETR1-dependent manner and in the cytokinin signaling pathway. {ECO:0000269|PubMed:11370868, ECO:0000269|PubMed:11574878, ECO:0000269|PubMed:15282545, ECO:0000269|PubMed:16407152}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015959594.10.0two-component response regulator ARR2
RefseqXP_025694589.10.0two-component response regulator ARR2
SwissprotQ9ZWJ91e-173ARR2_ARATH; Two-component response regulator ARR2
TrEMBLA0A444WPK30.0A0A444WPK3_ARAHY; Two-component response regulator
STRINGGLYMA15G15520.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-167response regulator 2
Publications ? help Back to Top
  1. Takahashi N, et al.
    Cytokinins control endocycle onset by promoting the expression of an APC/C activator in Arabidopsis roots.
    Curr. Biol., 2013. 23(18): p. 1812-7
    [PMID:24035544]
  2. Ge XM, et al.
    Heterotrimeric G protein mediates ethylene-induced stomatal closure via hydrogen peroxide synthesis in Arabidopsis.
    Plant J., 2015. 82(1): p. 138-50
    [PMID:25704455]
  3. Takahashi N,Umeda M
    Cytokinins promote onset of endoreplication by controlling cell cycle machinery.
    Plant Signal Behav, 2014. 9(8): p. e29396
    [PMID:25763620]
  4. Kobayashi K, et al.
    Shoot Removal Induces Chloroplast Development in Roots via Cytokinin Signaling.
    Plant Physiol., 2017. 173(4): p. 2340-2355
    [PMID:28193764]
  5. Arnaud D, et al.
    Cytokinin-Mediated Regulation of Reactive Oxygen Species Homeostasis Modulates Stomatal Immunity in Arabidopsis.
    Plant Cell, 2017. 29(3): p. 543-559
    [PMID:28254779]
  6. Zhang TQ, et al.
    A Two-Step Model for de Novo Activation of WUSCHEL during Plant Shoot Regeneration.
    Plant Cell, 2017. 29(5): p. 1073-1087
    [PMID:28389585]
  7. Meng WJ, et al.
    Type-B ARABIDOPSIS RESPONSE REGULATORs Specify the Shoot Stem Cell Niche by Dual Regulation of WUSCHEL.
    Plant Cell, 2017. 29(6): p. 1357-1372
    [PMID:28576846]
  8. Zhang F,May A,Irish VF
    Type-B ARABIDOPSIS RESPONSE REGULATORs Directly Activate WUSCHEL.
    Trends Plant Sci., 2017. 22(10): p. 815-817
    [PMID:28886911]
  9. Takatsuka H,Higaki T,Umeda M
    Actin Reorganization Triggers Rapid Cell Elongation in Roots.
    Plant Physiol., 2018. 178(3): p. 1130-1141
    [PMID:30185441]