PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy021736

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bHLH

Protein Properties

Length: 273aa MW: 29065 Da PI: 7.6734

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59520426	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.5	6.7e-10	123	167	5	54
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P+ + K + a++L + v+Y+k L Ahy021736 123 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 167 99*********************55......**************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	2.88E-15	116	177	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	16.12	118	167	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	6.9E-15	120	177	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	2.6E-7	123	167	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	9.5E-11	124	173	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence Send to blast
PRPPPPPPPA AAAAASPAAP MMLQLSSDDA SAAYLVGATA GGGFHPSPVY ELGLSLEQGN 60 GGGFLKPEDA SGSGKRFRDD VVDGRAKNVF HGQPMPTTVP AAPHPPGMRP RVRARRGQAT 120 DPHSIAERLR RERIAERIRA LQELVPSVNK TDRAAMLDEI VDYVKFLRLQ VKVLSMSRLG 180 GAGAVAPLVT DIPLSSVEEE GGEGRNQPAW EKWSNDGTER QVAKLMEENV GTAMQFLQSK 240 ALCIMPISLA SAIYQSQPPD TSSIVKPETN PPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	127	132	RLRRER

Functional Description ? help Back to Top
Source	Description
UniProt	Required for ovule fertilization. {ECO:0000269\|PubMed:15634699}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016182857.1	0.0	transcription factor UNE12 isoform X1
Refseq	XP_025632324.1	0.0	transcription factor UNE12 isoform X1
Swissprot	O22768	1e-119	UNE12_ARATH; Transcription factor UNE12
TrEMBL	A0A445AEH1	0.0	A0A445AEH1_ARAHY; Uncharacterized protein
STRING	GLYMA19G34360.1	1e-149	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02590.2	1e-115	bHLH family protein

Publications ? help Back to Top
Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. Differentiation, 2010. 80(1): p. 1-8 [PMID:20219281] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444]