PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy021861
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 196aa    MW: 21847.8 Da    PI: 7.3672
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59558858PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.93.8e-213181255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               +y+GVr+++ +g+++AeIrdp+++g   r++lg+f+ta eAaka+++a+ kl+g
  Ahy021861 31 HYRGVRQRP-WGKFAAEIRDPNKRG--SRVWLGTFDTAIEAAKAYDRAAFKLRG 81
               8********.**********96655..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.2E-333090IPR001471AP2/ERF domain
PROSITE profilePS5103224.2633189IPR001471AP2/ERF domain
SMARTSM003802.6E-393195IPR001471AP2/ERF domain
SuperFamilySSF541713.53E-233191IPR016177DNA-binding domain
CDDcd000181.42E-303189No hitNo description
PfamPF008475.0E-153181IPR001471AP2/ERF domain
PRINTSPR003676.5E-143243IPR001471AP2/ERF domain
PRINTSPR003676.5E-147191IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
FGNPDPKPEA VEPFVQQQQQ QKQQPEPEKK HYRGVRQRPW GKFAAEIRDP NKRGSRVWLG  60
TFDTAIEAAK AYDRAAFKLR GSKAILNFPL EVESMTTSAS ASTSGDGGDR KRRREEEEVA  120
PMTKAVEEEV VEVVMPVVKK EKTTTFESEV NCIRELPLTP SIWTGFWDSD VKGTGMGIFS  180
VPPLSPLSSP LAVMVV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-333094468ATERF1
3gcc_A8e-333094468ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1109113RKRRR
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase/phosphatase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional activator (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethylene. {ECO:0000269|PubMed:10945353}.
UniProtINDUCTION: Strongly induced by ethephon (ethylene-releasing compound) in buds and in leaves. Also strongly induced by cycloheximide, mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by a protein kinase cascade, and to be negatively regulated by protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016187845.11e-104ethylene-responsive transcription factor 5
RefseqXP_025627637.11e-104ethylene-responsive transcription factor 5
SwissprotQ404787e-51ERF5_TOBAC; Ethylene-responsive transcription factor 5
SwissprotQ9LW486e-51ERF5_NICSY; Ethylene-responsive transcription factor 5
TrEMBLA0A445AS392e-96A0A445AS39_ARAHY; Uncharacterized protein
STRINGXP_004508947.12e-65(Cicer arietinum)