PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy021884
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 133aa    MW: 15480.4 Da    PI: 6.6831
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58466600PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.92.2e-1429109995
                HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SSSEE..EEE CS
         B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.grsefelvvk 95 
                   +  ++ lpkkf++++g++   s  l l+ ++g +W+v      ++g++++++GWkeFv    L++g ++ F+++ g+s     v+
  Ahy021884  29 TL-QDENFKLPKKFTRKYGSD--LSNPLYLKPPDGSEWRVDW--IIHDGGILFKEGWKEFVAYYSLDDGYVLRFEYNiGTSH--IEVQ 109
                44.44559**********988..6777***************..99999**************************9733333..3555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.101.5E-1915114IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.8E-1915114IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.88520114IPR003340B3 DNA binding domain
CDDcd100171.08E-1420112No hitNo description
SMARTSM010191.1E-1021114IPR003340B3 DNA binding domain
PfamPF023621.3E-1130109IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
MASSNYQQND HSPSNSPVIR FFKVILGKTL QDENFKLPKK FTRKYGSDLS NPLYLKPPDG  60
SEWRVDWIIH DGGILFKEGW KEFVAYYSLD DGYVLRFEYN IGTSHIEVQI SDMSGLQIKY  120
PVNDQIKEHP PQH
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025624611.12e-93B3 domain-containing transcription factor VRN1
TrEMBLA0A445B1U95e-92A0A445B1U9_ARAHY; Uncharacterized protein
STRINGGLYMA09G20150.11e-30(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.11e-18B3 family protein