PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy022108

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

CPP

Protein Properties

Length: 668aa MW: 72679.2 Da PI: 7.3949

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59540186	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	47.6	3.4e-15	246	284	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnCkkskClk+YC+Cfaag +C+++C+C++C N+ e Ahy022108 246 CKRCNCKKSKCLKLYCDCFAAGIYCADDCSCQSCLNRPE 284 89**********************************876 PP
2	TCR	50	6e-16	332	370	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCk+s C+kkYCeC++ag+ Cs+ C+Ce+CkN Ahy022108 332 RHKRGCNCKRSMCQKKYCECYQAGVGCSSGCRCEGCKNV 370 589***********************************6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM01114	2.8E-14	244	285	IPR033467	Tesmin/TSO1-like CXC domain
PROSITE profile	PS51634	34.623	245	372	IPR005172	CRC domain
Pfam	PF03638	1.5E-11	247	282	IPR005172	CRC domain
SMART	SM01114	7.8E-16	332	373	IPR033467	Tesmin/TSO1-like CXC domain
Pfam	PF03638	2.9E-11	334	369	IPR005172	CRC domain

Sequence ? help Back to Top
Protein Sequence Length: 668 aa Download sequence Send to blast
XNDCTSQLLP EQNLQDVKDW EDCDEMVSTS HVGAENVSQD ASEVTLKHHG LRRRCLQFEE 60 AASNARGSDK SCMKSNAAPI KIKMVKLSEP GTSSLFPQRC SGNSTVTCPK PSGIGLHLNS 120 IVNAMPPGCA ATTGIRSSDC LQGKKSALIS INKVENMKGR LTSSNIDGQS LIDSGNESQA 180 NISSLPVDSF ISGSHSPTEP VAICPESLHD KRKLSPTGDG YPEESKQPSP SKKKKRASSN 240 NDDNGCKRCN CKKSKCLKLY CDCFAAGIYC ADDCSCQSCL NRPEYENKVI ETRKQIESRN 300 PLAFLPKIVP QSTDRPSNNM EDAILMTPSS ARHKRGCNCK RSMCQKKYCE CYQAGVGCSS 360 GCRCEGCKNV YGTKEDYVAR DHVFNKERMG SRIENEPDGA FLNKLEMVAS KSDLYDLPHV 420 SPVTPSLQCS DQGKEAAKFG LHSGQHLPSS ETNVDMLPSS ANYNKSLENS QSVLANLETD 480 EMLETASYDW QVDCSDVMDQ SSPCDLVANI LQDTPLSNPE SMSSASLFTS STKECGNIPL 540 SQSQGRIRLI SGSSLRWRGS PNTPRARLGV KHLQSLDSES RLFDIMEDET PDVLKEGLTP 600 TKSVKANSPN QKQVSPPHSR LRGLGSSSSG GFRTGRKFIL KSVPSFPPLT PCVESRDNSS 660 EDLGNNAK

Sequence ? help Back to Top

Protein Sequence Length: 668 aa Download sequence Send to blast

XNDCTSQLLP EQNLQDVKDW EDCDEMVSTS HVGAENVSQD ASEVTLKHHG LRRRCLQFEE  60
AASNARGSDK SCMKSNAAPI KIKMVKLSEP GTSSLFPQRC SGNSTVTCPK PSGIGLHLNS  120
IVNAMPPGCA ATTGIRSSDC LQGKKSALIS INKVENMKGR LTSSNIDGQS LIDSGNESQA  180
NISSLPVDSF ISGSHSPTEP VAICPESLHD KRKLSPTGDG YPEESKQPSP SKKKKRASSN  240
NDDNGCKRCN CKKSKCLKLY CDCFAAGIYC ADDCSCQSCL NRPEYENKVI ETRKQIESRN  300
PLAFLPKIVP QSTDRPSNNM EDAILMTPSS ARHKRGCNCK RSMCQKKYCE CYQAGVGCSS  360
GCRCEGCKNV YGTKEDYVAR DHVFNKERMG SRIENEPDGA FLNKLEMVAS KSDLYDLPHV  420
SPVTPSLQCS DQGKEAAKFG LHSGQHLPSS ETNVDMLPSS ANYNKSLENS QSVLANLETD  480
EMLETASYDW QVDCSDVMDQ SSPCDLVANI LQDTPLSNPE SMSSASLFTS STKECGNIPL  540
SQSQGRIRLI SGSSLRWRGS PNTPRARLGV KHLQSLDSES RLFDIMEDET PDVLKEGLTP  600
TKSVKANSPN QKQVSPPHSR LRGLGSSSSG GFRTGRKFIL KSVPSFPPLT PCVESRDNSS  660
EDLGNNAK

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5fd3_A	7e-19	247	370	12	121	Protein lin-54 homolog
5fd3_B	7e-19	247	370	12	121	Protein lin-54 homolog
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016162685.1	0.0	protein tesmin/TSO1-like CXC 2
Refseq	XP_025659725.1	0.0	protein tesmin/TSO1-like CXC 2
TrEMBL	A0A445CW25	0.0	A0A445CW25_ARAHY; Uncharacterized protein
STRING	GLYMA17G31399.1	0.0	(Glycine max)