PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy022375

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

NAC

Protein Properties

Length: 566aa MW: 63104 Da PI: 9.5622

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S54172335	PU_unref	Unigene	View CDS
gnl\|UG\|Ahy#S54172483	PU_unref	Unigene	View CDS
gnl\|UG\|Ahy#S58470220	PU_ref	Unigene	View CDS
PUT-171a-Arachis_hypogaea-14906	PU_unref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.5	2.7e-53	264	391	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 lppGfrFhPtdeelvv+yLkkk+++ +l++ +i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vl++ ++++ Ahy022375 264 LPPGFRFHPTDEELVVHYLKKKAASAPLPV-AIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSgGTQK 362 79**************************.88***********988899***********************************9977788 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfy g+ p+g kt+W+mheyrl Ahy022375 363 VGVKKALVFYGGKPPRGIKTNWIMHEYRL 391 *************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	5.75E-65	254	425	IPR003441	NAC domain
PROSITE profile	PS51005	62.033	264	425	IPR003441	NAC domain
Pfam	PF02365	8.7E-28	265	391	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence Send to blast
MAHPSEPLGG SPPPSRCGAR FFQKIEXVDM TSAVELDGTL ELNDGRSIAL RESIVELLEG 60 LVVISDVSLM VLLVVNLHDL PAYSRLQCAV VVIQIRQRES VKSGECAAAC APSAVESRRS 120 TVARVFRVNR DRAAIAMDDS SVRWLLQFWK QMKVSISAPG RLESKGLEFK PFRFQQAVVS 180 TQSVHYGRGM QITRTKQHMT FRLNGSSSES TVARTNQPTT QIHKKEGELL KEEEEEKKKK 240 KKKSERSINM ESTDSSTGSQ QPNLPPGFRF HPTDEELVVH YLKKKAASAP LPVAIIAEVD 300 LYKFDPWELP AKATFGEQEW YFFSPRDRKY PNGARPNRAA TSGYWKATGT DKPVLTSGGT 360 QKVGVKKALV FYGGKPPRGI KTNWIMHEYR LADNKPNNRP PGCDLGNKKN SLRLDDWVLC 420 RIYKKNNTHR SPMEHEREDS MDDMIGGIPP SINVGQMNAR FHLSKMSTSF SNALLENDHH 480 HHQNLLEGMM LGGGNNNNNN VVPPNMLGLG SASNTINNNS NKAELSFVPT MTTSSNTMGL 540 SSLYWNEDDV AASNKRFNLE SGDHNX

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence Send to blast

MAHPSEPLGG SPPPSRCGAR FFQKIEXVDM TSAVELDGTL ELNDGRSIAL RESIVELLEG  60
LVVISDVSLM VLLVVNLHDL PAYSRLQCAV VVIQIRQRES VKSGECAAAC APSAVESRRS  120
TVARVFRVNR DRAAIAMDDS SVRWLLQFWK QMKVSISAPG RLESKGLEFK PFRFQQAVVS  180
TQSVHYGRGM QITRTKQHMT FRLNGSSSES TVARTNQPTT QIHKKEGELL KEEEEEKKKK  240
KKKSERSINM ESTDSSTGSQ QPNLPPGFRF HPTDEELVVH YLKKKAASAP LPVAIIAEVD  300
LYKFDPWELP AKATFGEQEW YFFSPRDRKY PNGARPNRAA TSGYWKATGT DKPVLTSGGT  360
QKVGVKKALV FYGGKPPRGI KTNWIMHEYR LADNKPNNRP PGCDLGNKKN SLRLDDWVLC  420
RIYKKNNTHR SPMEHEREDS MDDMIGGIPP SINVGQMNAR FHLSKMSTSF SNALLENDHH  480
HHQNLLEGMM LGGGNNNNNN VVPPNMLGLG SASNTINNNS NKAELSFVPT MTTSSNTMGL  540
SSLYWNEDDV AASNKRFNLE SGDHNX

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	3e-75	263	427	14	170	Stress-induced transcription factor NAC1
Search in ModeBase

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	236	242	KKKKKKK

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor of the NAC family (Probable). Together with NAC018/NARS2, regulates embryogenesis by regulating the development and degeneration of ovule integuments, a process required for intertissue communication between the embryo and the maternal integument (PubMed:18849494). {ECO:0000269\|PubMed:18849494, ECO:0000305}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By Jasmonic acid (JA). {ECO:0000269\|PubMed:16805732}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025614862.1	0.0	NAC transcription factor 56
Swissprot	Q9LD44	1e-114	NAC56_ARATH; NAC transcription factor 56
TrEMBL	A0A371E5S2	0.0	A0A371E5S2_MUCPR; NAC transcription factor 56
STRING	XP_007149615.1	0.0	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-115	NAC domain containing protein 2

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546]