PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy022376
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WOX
Protein Properties Length: 208aa    MW: 24005 Da    PI: 8.0986
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59553742PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox69.54.2e-2286146257
                T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
   Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                r+R+t+t+ ql++Le+ F + n +ps+e+++e++++l    +++e++V++WFqNrRa+ k+
  Ahy022376  86 RQRWTPTPLQLQILERIFDQgNGTPSKEKIKEITAELshhgQISETNVYNWFQNRRARSKR 146
                89*****************99**************************************97 PP
2Wus_type_Homeobox102.72.6e-3385147264
  Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                        +r+RWtPtp Q++iLe+++++G  tP+ke+i++itaeL+++G+i+++NV++WFQNr+aR+++k
          Ahy022376  85 SRQRWTPTPLQLQILERIFDQGNGTPSKEKIKEITAELSHHGQISETNVYNWFQNRRARSKRK 147
                        789***********************************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.1E-1881151IPR009057Homeodomain-like
PROSITE profilePS5007115.32182147IPR001356Homeobox domain
SuperFamilySSF466894.71E-1984149IPR009057Homeodomain-like
SMARTSM003891.2E-1484151IPR001356Homeobox domain
PfamPF000466.5E-2086146IPR001356Homeobox domain
CDDcd000861.15E-1286147No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MIEWQKQLQN NEKADRTNNN MVFVKVMTDE QLETLRKQIA VYATLCDQLV EMHRTLSTHH  60
DLTGVRVGNI YCDSLMTSAG QKITSRQRWT PTPLQLQILE RIFDQGNGTP SKEKIKEITA  120
ELSHHGQISE TNVYNWFQNR RARSKRKLQN NVPPTTIESE VDAEVDSKDK KTRPEELIGS  180
QQQQHSTIIM TNASATNRPE KLCFQNPE
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor which may be involved in developmental processes. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016176952.11e-154WUSCHEL-related homeobox 13 isoform X3
RefseqXP_020966581.11e-154WUSCHEL-related homeobox 13 isoform X3
RefseqXP_025677316.11e-154WUSCHEL-related homeobox 13 isoform X2
RefseqXP_025677317.11e-154WUSCHEL-related homeobox 13 isoform X2
SwissprotO817887e-74WOX13_ARATH; WUSCHEL-related homeobox 13
TrEMBLA0A444XU751e-153A0A444XU75_ARAHY; Uncharacterized protein
STRINGGLYMA10G43580.21e-100(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.13e-76WUSCHEL related homeobox 13
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Dolzblasz A, et al.
    Stem Cell Regulation by Arabidopsis WOX Genes.
    Mol Plant, 2016. 9(7): p. 1028-39
    [PMID:27109605]