PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy022408
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Dof
Protein Properties Length: 224aa    MW: 24316.3 Da    PI: 7.8642
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S54147401PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof127.83.1e-4075134261
     zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s
  Ahy022408  75 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNS 134
                7899*****************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027011.1E-3277133IPR003851Zinc finger, Dof-type
ProDomPD0074781.0E-2778132IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.97579133IPR003851Zinc finger, Dof-type
PROSITE patternPS01361081117IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
XSSPPTEVEV SSVSQPETEE PSKRELTSTQ DKETTEDLKS PTTTSSGIFE NPKTPTNGGE  60
QSGPVFHKKK TPKKPDKILP CPRCNSMDTK FCYYNNYNVN QPRHFCKNCQ RYWTAGGTMR  120
NVPVGAGRRK NKNSAASHYR QIMVPEALQA AHHGLHNAVL TFGPDSPLCD SMSSVLNIAE  180
KATNGVVNGF HAPEAATTFV SYGRDDDGND HSVGVSGTTS TSSX
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Regulates a photoperiodic flowering response. Transcriptional repressor of 'CONSTANS' expression. The stability of CDF2 is controlled by 'GIGANTEA' and redundantly by ADO3, ADO2 and/or ADO1. {ECO:0000250, ECO:0000269|PubMed:19619493}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Circadian-regulation. Highly expressed at the beginning of the light period, then decreases, reaching a minimum between 16 and 29 hours after dawn before rising again at the end of the day. Regulated at the protein level by ADO3 and GI pos-transcriptionally. {ECO:0000269|PubMed:19619493}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016190923.11e-153cyclic dof factor 1
RefseqXP_025639089.11e-153cyclic dof factor 1 isoform X2
SwissprotQ93ZL54e-51CDF2_ARATH; Cyclic dof factor 2
TrEMBLA0A445DNU31e-152A0A445DNU3_ARAHY; Uncharacterized protein
STRINGGLYMA07G35690.11e-90(Glycine max)
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]